Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC4.68□□□□□ -1.66
COL3A1P02461 AC096751.1-202ENST00000502691 1067 ntBASIC4.68□□□□□ -1.66
COL3A1P02461 HSPD1P15-201ENST00000505573 1122 ntBASIC4.68□□□□□ -1.66
COL3A1P02461 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.68□□□□□ -1.66
COL3A1P02461 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.68□□□□□ -1.66
COL3A1P02461 DEFB109D-201ENST00000529497 240 ntBASIC4.68□□□□□ -1.66
COL3A1P02461 CENPUP2-201ENST00000555897 1186 ntBASIC4.68□□□□□ -1.66
COL3A1P02461 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
COL3A1P02461 AC069545.1-201ENST00000605671 358 ntBASIC4.68□□□□□ -1.66
COL3A1P02461 AC005021.1-201ENST00000608730 355 ntBASIC4.68□□□□□ -1.66
COL3A1P02461 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.68□□□□□ -1.66
COL3A1P02461 AC090517.2-201ENST00000614966 680 ntBASIC4.68□□□□□ -1.66
COL3A1P02461 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.68□□□□□ -1.66
COL3A1P02461 AC138932.5-201ENST00000617759 563 ntBASIC4.68□□□□□ -1.66
COL3A1P02461 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.68□□□□□ -1.66
COL3A1P02461 AC103858.2-201ENST00000621471 543 ntBASIC4.68□□□□□ -1.66
COL3A1P02461 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
COL3A1P02461 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.68□□□□□ -1.66
COL3A1P02461 AC090337.1-201ENST00000579651 2074 ntBASIC4.67□□□□□ -1.66
COL3A1P02461 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL3A1P02461 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.67□□□□□ -1.66
COL3A1P02461 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
COL3A1P02461 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
COL3A1P02461 AL391994.1-201ENST00000254724 282 ntBASIC4.67□□□□□ -1.66
COL3A1P02461 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL3A1P02461 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
COL3A1P02461 Y_RNA.70-201ENST00000362886 110 ntBASIC4.67□□□□□ -1.66
COL3A1P02461 Y_RNA.111-201ENST00000363248 100 ntBASIC4.67□□□□□ -1.66
COL3A1P02461 Y_RNA.192-201ENST00000363977 102 ntBASIC4.67□□□□□ -1.66
COL3A1P02461 XGY1-201ENST00000381172 446 ntBASIC4.67□□□□□ -1.66
COL3A1P02461 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.67□□□□□ -1.66
COL3A1P02461 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.67□□□□□ -1.66
COL3A1P02461 RPL7P30-201ENST00000420888 709 ntBASIC4.67□□□□□ -1.66
COL3A1P02461 MTND1P14-201ENST00000427400 950 ntBASIC4.67□□□□□ -1.66
COL3A1P02461 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.67□□□□□ -1.66
COL3A1P02461 AC004865.1-201ENST00000442276 1003 ntBASIC4.67□□□□□ -1.66
COL3A1P02461 ST13P20-201ENST00000447996 1065 ntBASIC4.67□□□□□ -1.66
COL3A1P02461 AC003071.1-201ENST00000451219 789 ntBASIC4.67□□□□□ -1.66
COL3A1P02461 AC011979.1-201ENST00000472300 483 ntBASIC4.67□□□□□ -1.66
COL3A1P02461 AC037198.2-201ENST00000478845 733 ntBASIC4.67□□□□□ -1.66
COL3A1P02461 RPS3AP50-201ENST00000487064 803 ntBASIC4.67□□□□□ -1.66
COL3A1P02461 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.67□□□□□ -1.66
COL3A1P02461 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.67□□□□□ -1.66
COL3A1P02461 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
COL3A1P02461 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.67□□□□□ -1.66
COL3A1P02461 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.67□□□□□ -1.66
COL3A1P02461 HIGD1AP17-201ENST00000554576 276 ntBASIC4.67□□□□□ -1.66
COL3A1P02461 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.67□□□□□ -1.66
COL3A1P02461 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL3A1P02461 AC006272.2-201ENST00000594725 163 ntBASIC4.67□□□□□ -1.66
COL3A1P02461 HMGB1P50-201ENST00000605814 607 ntBASIC4.67□□□□□ -1.66
COL3A1P02461 AC008945.2-201ENST00000606056 604 ntBASIC4.67□□□□□ -1.66
COL3A1P02461 AC006566.1-201ENST00000608943 513 ntBASIC4.67□□□□□ -1.66
COL3A1P02461 AC019176.2-201ENST00000611579 315 ntBASIC4.67□□□□□ -1.66
COL3A1P02461 AC243654.2-201ENST00000612843 443 ntBASIC4.67□□□□□ -1.66
COL3A1P02461 MIR4278-201ENST00000636094 69 ntBASIC4.67□□□□□ -1.66
COL3A1P02461 AC099654.14-201ENST00000638599 341 ntBASIC4.67□□□□□ -1.66
COL3A1P02461 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL3A1P02461 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL3A1P02461 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL3A1P02461 AC058791.1-201ENST00000608412 3198 ntBASIC4.66□□□□□ -1.66
COL3A1P02461 CUL4AP1-201ENST00000514750 1863 ntBASIC4.66□□□□□ -1.66
COL3A1P02461 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
COL3A1P02461 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.66□□□□□ -1.66
COL3A1P02461 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL3A1P02461 FGF7P2-201ENST00000332473 296 ntBASIC4.66□□□□□ -1.66
COL3A1P02461 RNU6-560P-201ENST00000364007 108 ntBASIC4.66□□□□□ -1.66
COL3A1P02461 RNU4-76P-201ENST00000364509 141 ntBASIC4.66□□□□□ -1.66
COL3A1P02461 MTCO3P31-201ENST00000405526 789 ntBASIC4.66□□□□□ -1.66
COL3A1P02461 AL512430.2-201ENST00000406786 339 ntBASIC4.66□□□□□ -1.66
COL3A1P02461 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
COL3A1P02461 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.66□□□□□ -1.66
COL3A1P02461 AC005300.1-201ENST00000428401 373 ntBASIC4.66□□□□□ -1.66
COL3A1P02461 MTND3P10-201ENST00000450967 341 ntBASIC4.66□□□□□ -1.66
COL3A1P02461 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.66□□□□□ -1.66
COL3A1P02461 AP000942.1-201ENST00000463969 747 ntBASIC4.66□□□□□ -1.66
COL3A1P02461 AC084024.2-201ENST00000503480 791 ntBASIC4.66□□□□□ -1.66
COL3A1P02461 WBP1LP4-201ENST00000505043 344 ntBASIC4.66□□□□□ -1.66
COL3A1P02461 AC104090.1-201ENST00000506341 1171 ntBASIC4.66□□□□□ -1.66
COL3A1P02461 MTND2P33-201ENST00000506452 1031 ntBASIC4.66□□□□□ -1.66
COL3A1P02461 Y_RNA.702-201ENST00000516843 96 ntBASIC4.66□□□□□ -1.66
COL3A1P02461 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.66□□□□□ -1.66
COL3A1P02461 AC025881.1-201ENST00000518851 512 ntBASIC4.66□□□□□ -1.66
COL3A1P02461 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.66□□□□□ -1.66
COL3A1P02461 GLYCAM1-201ENST00000546596 285 ntBASIC4.66□□□□□ -1.66
COL3A1P02461 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.66□□□□□ -1.66
COL3A1P02461 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.66□□□□□ -1.66
COL3A1P02461 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.66□□□□□ -1.66
COL3A1P02461 RPL21P12-201ENST00000559810 515 ntBASIC4.66□□□□□ -1.66
COL3A1P02461 AC011260.1-201ENST00000578420 472 ntBASIC4.66□□□□□ -1.66
COL3A1P02461 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.66□□□□□ -1.66
COL3A1P02461 AL159169.2-201ENST00000610061 1269 ntBASIC4.66□□□□□ -1.66
COL3A1P02461 AC090970.3-201ENST00000612566 866 ntBASIC4.66□□□□□ -1.66
COL3A1P02461 AC072046.2-201ENST00000618366 268 ntBASIC4.66□□□□□ -1.66
COL3A1P02461 AL356321.1-201ENST00000621360 228 ntBASIC4.66□□□□□ -1.66
COL3A1P02461 AP000776.1-201ENST00000530032 1663 ntBASIC4.66□□□□□ -1.66
COL3A1P02461 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
COL3A1P02461 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
COL3A1P02461 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.66□□□□□ -1.66
COL3A1P02461 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 252.5 ms