Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AP001207.1-201ENST00000524051 481 ntBASIC2.48□□□□□ -2.01
TNFP01375 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.48□□□□□ -2.01
TNFP01375 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
TNFP01375 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.48□□□□□ -2.01
TNFP01375 AC013412.1-201ENST00000610687 192 ntBASIC2.48□□□□□ -2.01
TNFP01375 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TNFP01375 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.48□□□□□ -2.01
TNFP01375 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
TNFP01375 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.48□□□□□ -2.01
TNFP01375 ELF2P3-201ENST00000445099 1506 ntBASIC2.47□□□□□ -2.01
TNFP01375 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TNFP01375 AC092447.7-201ENST00000422212 1621 ntBASIC2.47□□□□□ -2.01
TNFP01375 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
TNFP01375 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
TNFP01375 SNORA36C-201ENST00000384289 132 ntBASIC2.47□□□□□ -2.01
TNFP01375 RNA5SP210-201ENST00000391034 120 ntBASIC2.47□□□□□ -2.01
TNFP01375 RSL24D1P4-201ENST00000400938 484 ntBASIC2.47□□□□□ -2.01
TNFP01375 RNA5SP129-201ENST00000410276 118 ntBASIC2.47□□□□□ -2.01
TNFP01375 RNU2-6P-201ENST00000411404 190 ntBASIC2.47□□□□□ -2.01
TNFP01375 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC2.47□□□□□ -2.01
TNFP01375 AC009963.1-201ENST00000417265 157 ntBASIC2.47□□□□□ -2.01
TNFP01375 HSPE1P1-201ENST00000421494 318 ntBASIC2.47□□□□□ -2.01
TNFP01375 AL606490.7-201ENST00000433136 191 ntBASIC2.47□□□□□ -2.01
TNFP01375 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.47□□□□□ -2.01
TNFP01375 AC104389.3-201ENST00000445629 235 ntBASIC2.47□□□□□ -2.01
TNFP01375 AC128713.1-201ENST00000471495 306 ntBASIC2.47□□□□□ -2.01
TNFP01375 RPL23AP45-201ENST00000476406 468 ntBASIC2.47□□□□□ -2.01
TNFP01375 NCOR1P1-202ENST00000486162 291 ntBASIC2.47□□□□□ -2.01
TNFP01375 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.47□□□□□ -2.01
TNFP01375 MTATP6P22-201ENST00000507369 598 ntBASIC2.47□□□□□ -2.01
TNFP01375 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.47□□□□□ -2.01
TNFP01375 AP002812.4-201ENST00000532139 286 ntBASIC2.47□□□□□ -2.01
TNFP01375 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.47□□□□□ -2.01
TNFP01375 RPL23AP84-201ENST00000571193 464 ntBASIC2.47□□□□□ -2.01
TNFP01375 MIR3690-201ENST00000580266 75 ntBASIC2.47□□□□□ -2.01
TNFP01375 AC022069.1-201ENST00000582910 658 ntBASIC2.47□□□□□ -2.01
TNFP01375 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.47□□□□□ -2.01
TNFP01375 FRG1DP-201ENST00000635586 771 ntBASIC2.47□□□□□ -2.01
TNFP01375 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.46□□□□□ -2.02
TNFP01375 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.46□□□□□ -2.02
TNFP01375 RNU6-356P-201ENST00000384140 107 ntBASIC2.46□□□□□ -2.02
TNFP01375 SNORA67.4-201ENST00000384688 142 ntBASIC2.46□□□□□ -2.02
TNFP01375 MIR181B1-201ENST00000385240 110 ntBASIC2.46□□□□□ -2.02
TNFP01375 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.46□□□□□ -2.02
TNFP01375 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.46□□□□□ -2.02
TNFP01375 RPL21P112-201ENST00000434403 463 ntBASIC2.46□□□□□ -2.02
TNFP01375 MRPL50P4-201ENST00000446432 475 ntBASIC2.46□□□□□ -2.02
TNFP01375 AC008280.2-201ENST00000455473 307 ntBASIC2.46□□□□□ -2.02
TNFP01375 VN1R17P-201ENST00000472048 1090 ntBASIC2.46□□□□□ -2.02
TNFP01375 HMGN2P13-201ENST00000476476 274 ntBASIC2.46□□□□□ -2.02
TNFP01375 AC126182.1-201ENST00000478134 357 ntBASIC2.46□□□□□ -2.02
TNFP01375 RN7SKP244-201ENST00000516513 307 ntBASIC2.46□□□□□ -2.02
TNFP01375 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.46□□□□□ -2.02
TNFP01375 MTCO3P13-201ENST00000577757 781 ntBASIC2.46□□□□□ -2.02
TNFP01375 DNAJC19P3-201ENST00000594491 331 ntBASIC2.46□□□□□ -2.02
TNFP01375 AC107871.2-201ENST00000612894 502 ntBASIC2.46□□□□□ -2.02
TNFP01375 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TNFP01375 AL590808.1-201ENST00000618696 141 ntBASIC2.46□□□□□ -2.02
TNFP01375 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.46□□□□□ -2.02
TNFP01375 AC090617.7-201ENST00000623952 126 ntBASIC2.46□□□□□ -2.02
TNFP01375 AC011978.2-201ENST00000569835 2054 ntBASIC2.46□□□□□ -2.02
TNFP01375 AL355596.1-201ENST00000565399 3996 ntBASIC2.46□□□□□ -2.02
TNFP01375 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
TNFP01375 AC004925.1-201ENST00000624256 2706 ntBASIC2.46□□□□□ -2.02
TNFP01375 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.45□□□□□ -2.02
TNFP01375 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.45□□□□□ -2.02
TNFP01375 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.45□□□□□ -2.02
TNFP01375 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
TNFP01375 MTND4LP20-201ENST00000402379 270 ntBASIC2.45□□□□□ -2.02
TNFP01375 AC080125.1-201ENST00000414888 684 ntBASIC2.45□□□□□ -2.02
TNFP01375 RPL23AP74-201ENST00000437246 471 ntBASIC2.45□□□□□ -2.02
TNFP01375 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.45□□□□□ -2.02
TNFP01375 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.45□□□□□ -2.02
TNFP01375 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.45□□□□□ -2.02
TNFP01375 GSTA11P-201ENST00000452866 669 ntBASIC2.45□□□□□ -2.02
TNFP01375 CACYBPP2-201ENST00000453625 678 ntBASIC2.45□□□□□ -2.02
TNFP01375 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.45□□□□□ -2.02
TNFP01375 TRBV12-1-201ENST00000479785 344 ntBASIC2.45□□□□□ -2.02
TNFP01375 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.45□□□□□ -2.02
TNFP01375 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
TNFP01375 AC109329.2-201ENST00000519658 482 ntBASIC2.45□□□□□ -2.02
TNFP01375 CKS1BP7-201ENST00000522230 235 ntBASIC2.45□□□□□ -2.02
TNFP01375 AP003122.3-201ENST00000526316 255 ntBASIC2.45□□□□□ -2.02
TNFP01375 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.45□□□□□ -2.02
TNFP01375 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.45□□□□□ -2.02
TNFP01375 OR4U1P-201ENST00000554958 912 ntBASIC2.45□□□□□ -2.02
TNFP01375 ATP5F1P7-201ENST00000567330 760 ntBASIC2.45□□□□□ -2.02
TNFP01375 SNORD53-201ENST00000579969 78 ntBASIC2.45□□□□□ -2.02
TNFP01375 MIR5092-201ENST00000583139 88 ntBASIC2.45□□□□□ -2.02
TNFP01375 AL109653.1-201ENST00000603091 248 ntBASIC2.45□□□□□ -2.02
TNFP01375 AL627309.6-201ENST00000606857 840 ntBASIC2.45□□□□□ -2.02
TNFP01375 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.45□□□□□ -2.02
TNFP01375 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
TNFP01375 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
TNFP01375 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.45□□□□□ -2.02
TNFP01375 ZNF33CP-201ENST00000432492 2030 ntBASIC2.44□□□□□ -2.02
TNFP01375 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
TNFP01375 SNORD21-201ENST00000383953 95 ntBASIC2.44□□□□□ -2.02
TNFP01375 MIR518C-201ENST00000384822 101 ntBASIC2.44□□□□□ -2.02
TNFP01375 AL590004.2-201ENST00000404787 371 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms