Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.85□□□□□ -1.79
PCF11O94913 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.85□□□□□ -1.79
PCF11O94913 NDUFA5P6-201ENST00000542110 379 ntBASIC3.85□□□□□ -1.79
PCF11O94913 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.85□□□□□ -1.79
PCF11O94913 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.85□□□□□ -1.79
PCF11O94913 AC123786.2-201ENST00000603459 275 ntBASIC3.85□□□□□ -1.79
PCF11O94913 AC114546.3-201ENST00000623582 1734 ntBASIC3.85□□□□□ -1.79
PCF11O94913 AC110994.2-201ENST00000635481 492 ntBASIC3.85□□□□□ -1.79
PCF11O94913 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PCF11O94913 AC007342.7-201ENST00000624610 2337 ntBASIC3.85□□□□□ -1.79
PCF11O94913 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PCF11O94913 AC093311.1-201ENST00000506586 2021 ntBASIC3.85□□□□□ -1.79
PCF11O94913 AL359715.4-201ENST00000606629 1436 ntBASIC3.85□□□□□ -1.79
PCF11O94913 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.85□□□□□ -1.79
PCF11O94913 SNORA64-201ENST00000384674 134 ntBASIC3.85□□□□□ -1.79
PCF11O94913 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PCF11O94913 AC098592.2-201ENST00000413158 265 ntBASIC3.85□□□□□ -1.79
PCF11O94913 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.85□□□□□ -1.79
PCF11O94913 RPL31P45-201ENST00000419532 356 ntBASIC3.85□□□□□ -1.79
PCF11O94913 AC244505.4-201ENST00000434905 287 ntBASIC3.85□□□□□ -1.79
PCF11O94913 SSXP5-201ENST00000443473 287 ntBASIC3.85□□□□□ -1.79
PCF11O94913 snoU13.18-201ENST00000459483 104 ntBASIC3.85□□□□□ -1.79
PCF11O94913 AC116337.1-201ENST00000509680 687 ntBASIC3.85□□□□□ -1.79
PCF11O94913 AC034244.2-201ENST00000514668 858 ntBASIC3.85□□□□□ -1.79
PCF11O94913 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.85□□□□□ -1.79
PCF11O94913 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.85□□□□□ -1.79
PCF11O94913 AC004825.2-201ENST00000616634 455 ntBASIC3.85□□□□□ -1.79
PCF11O94913 U4.3-201ENST00000621047 82 ntBASIC3.85□□□□□ -1.79
PCF11O94913 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PCF11O94913 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
PCF11O94913 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
PCF11O94913 AC022336.2-201ENST00000568966 2538 ntBASIC3.84□□□□□ -1.79
PCF11O94913 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.84□□□□□ -1.79
PCF11O94913 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
PCF11O94913 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.8
PCF11O94913 Y_RNA.116-201ENST00000363292 103 ntBASIC3.84□□□□□ -1.8
PCF11O94913 RNU6-603P-201ENST00000411403 107 ntBASIC3.84□□□□□ -1.8
PCF11O94913 NDUFA5P4-201ENST00000436704 385 ntBASIC3.84□□□□□ -1.8
PCF11O94913 RPL23AP45-201ENST00000476406 468 ntBASIC3.84□□□□□ -1.8
PCF11O94913 OR4G11P-201ENST00000492842 939 ntBASIC3.84□□□□□ -1.8
PCF11O94913 AC108471.1-201ENST00000513977 287 ntBASIC3.84□□□□□ -1.8
PCF11O94913 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.84□□□□□ -1.8
PCF11O94913 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.84□□□□□ -1.8
PCF11O94913 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.84□□□□□ -1.8
PCF11O94913 RPL23AP84-201ENST00000571193 464 ntBASIC3.84□□□□□ -1.8
PCF11O94913 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
PCF11O94913 MIR5092-201ENST00000583139 88 ntBASIC3.84□□□□□ -1.8
PCF11O94913 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.84□□□□□ -1.8
PCF11O94913 AC007423.1-201ENST00000605009 627 ntBASIC3.84□□□□□ -1.8
PCF11O94913 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
PCF11O94913 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCF11O94913 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.83□□□□□ -1.8
PCF11O94913 USP9YP20-201ENST00000419224 558 ntBASIC3.83□□□□□ -1.8
PCF11O94913 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.83□□□□□ -1.8
PCF11O94913 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.83□□□□□ -1.8
PCF11O94913 AL159169.1-201ENST00000421119 127 ntBASIC3.83□□□□□ -1.8
PCF11O94913 MTND2P2-201ENST00000434633 945 ntBASIC3.83□□□□□ -1.8
PCF11O94913 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.83□□□□□ -1.8
PCF11O94913 AC011753.1-201ENST00000451001 220 ntBASIC3.83□□□□□ -1.8
PCF11O94913 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
PCF11O94913 AC010928.3-201ENST00000587712 541 ntBASIC3.83□□□□□ -1.8
PCF11O94913 AC069234.5-201ENST00000611056 416 ntBASIC3.83□□□□□ -1.8
PCF11O94913 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCF11O94913 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCF11O94913 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.82□□□□□ -1.8
PCF11O94913 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
PCF11O94913 RN7SKP44-201ENST00000363602 316 ntBASIC3.82□□□□□ -1.8
PCF11O94913 RNU4-7P-201ENST00000364758 141 ntBASIC3.82□□□□□ -1.8
PCF11O94913 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PCF11O94913 SEC63P1-201ENST00000425785 1258 ntBASIC3.82□□□□□ -1.8
PCF11O94913 AL606490.7-201ENST00000433136 191 ntBASIC3.82□□□□□ -1.8
PCF11O94913 TRIM60P18-201ENST00000441518 828 ntBASIC3.82□□□□□ -1.8
PCF11O94913 HMGB1P48-201ENST00000446155 598 ntBASIC3.82□□□□□ -1.8
PCF11O94913 RPL9P33-201ENST00000484311 566 ntBASIC3.82□□□□□ -1.8
PCF11O94913 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.82□□□□□ -1.8
PCF11O94913 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PCF11O94913 PNPT1P2-201ENST00000456768 2050 ntBASIC3.82□□□□□ -1.8
PCF11O94913 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCF11O94913 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCF11O94913 RNU6-321P-201ENST00000410912 106 ntBASIC3.81□□□□□ -1.8
PCF11O94913 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.81□□□□□ -1.8
PCF11O94913 ELOCP10-201ENST00000440624 327 ntBASIC3.81□□□□□ -1.8
PCF11O94913 CASP3P1-201ENST00000446037 609 ntBASIC3.81□□□□□ -1.8
PCF11O94913 RPL23AP42-201ENST00000471152 471 ntBASIC3.81□□□□□ -1.8
PCF11O94913 ACTR6P1-201ENST00000514311 1104 ntBASIC3.81□□□□□ -1.8
PCF11O94913 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
PCF11O94913 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.81□□□□□ -1.8
PCF11O94913 OR4U1P-201ENST00000554958 912 ntBASIC3.81□□□□□ -1.8
PCF11O94913 AC090953.1-201ENST00000604305 1092 ntBASIC3.81□□□□□ -1.8
PCF11O94913 ELOCP34-201ENST00000604436 327 ntBASIC3.81□□□□□ -1.8
PCF11O94913 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.8□□□□□ -1.8
PCF11O94913 MIR499A-201ENST00000384903 122 ntBASIC3.8□□□□□ -1.8
PCF11O94913 EIF5P1-201ENST00000400019 1231 ntBASIC3.8□□□□□ -1.8
PCF11O94913 GSTA12P-201ENST00000402398 508 ntBASIC3.8□□□□□ -1.8
PCF11O94913 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCF11O94913 RPL36AP33-201ENST00000450395 310 ntBASIC3.8□□□□□ -1.8
PCF11O94913 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.8□□□□□ -1.8
PCF11O94913 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.8□□□□□ -1.8
PCF11O94913 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.8□□□□□ -1.8
PCF11O94913 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms