Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 EEF1A1P39-201ENST00000440791 250 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 NAP1L1P3-201ENST00000462291 880 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 ST13P14-201ENST00000474095 734 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 RPS4XP6-201ENST00000477670 797 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.83□□□□□ -1.8
CACNA1FO60840 Y_RNA.655-201ENST00000515919 96 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.83□□□□□ -1.8
CACNA1FO60840 AP003717.3-201ENST00000544832 1180 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 AC023813.2-201ENST00000564321 469 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.83□□□□□ -1.8
CACNA1FO60840 AC005021.1-201ENST00000608730 355 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 AC090116.1-201ENST00000615679 446 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 AC007671.2-201ENST00000637344 619 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CACNA1FO60840 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CACNA1FO60840 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.83□□□□□ -1.8
CACNA1FO60840 MTND4P8-201ENST00000514997 1362 ntBASIC3.83□□□□□ -1.8
CACNA1FO60840 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.82□□□□□ -1.8
CACNA1FO60840 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.82□□□□□ -1.8
CACNA1FO60840 MAPK10-373ENST00000641983 6772 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CACNA1FO60840 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.82□□□□□ -1.8
CACNA1FO60840 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CACNA1FO60840 AC062016.1-201ENST00000355719 319 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CACNA1FO60840 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.82□□□□□ -1.8
CACNA1FO60840 MTND4P3-201ENST00000417829 541 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.82□□□□□ -1.8
CACNA1FO60840 AC092013.1-201ENST00000438795 332 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 AC108734.1-201ENST00000439549 399 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 AL360221.1-201ENST00000445989 335 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 AC069540.1-201ENST00000446320 988 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 AL589880.1-201ENST00000448271 287 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 MTND6P6-201ENST00000478031 263 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 RN7SL20P-201ENST00000488827 297 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CACNA1FO60840 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.82□□□□□ -1.8
CACNA1FO60840 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.82□□□□□ -1.8
CACNA1FO60840 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.82□□□□□ -1.8
CACNA1FO60840 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.82□□□□□ -1.8
CACNA1FO60840 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.82□□□□□ -1.8
CACNA1FO60840 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.82□□□□□ -1.8
CACNA1FO60840 AC135628.1-201ENST00000568867 534 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.82□□□□□ -1.8
CACNA1FO60840 AC068790.2-201ENST00000602601 557 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.82□□□□□ -1.8
CACNA1FO60840 AC099506.2-201ENST00000623074 221 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 OR1S1-201ENST00000624470 978 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CACNA1FO60840 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CACNA1FO60840 AC104454.1-201ENST00000421341 1401 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 AL122016.1-201ENST00000403365 367 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 AL136310.1-201ENST00000404926 654 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.82□□□□□ -1.8
CACNA1FO60840 AL356320.2-201ENST00000417263 507 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.82□□□□□ -1.8
CACNA1FO60840 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.82□□□□□ -1.8
CACNA1FO60840 ATG12P2-201ENST00000456830 416 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 AC037198.2-201ENST00000478845 733 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 AC080014.1-201ENST00000496877 1201 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 AC008837.1-201ENST00000511513 412 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 AC245166.1-201ENST00000521012 253 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.82□□□□□ -1.8
CACNA1FO60840 ZNF321P-202ENST00000550843 495 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.82□□□□□ -1.8
CACNA1FO60840 AC069304.3-201ENST00000603938 1084 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.82□□□□□ -1.8
CACNA1FO60840 AC010975.3-201ENST00000618727 978 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 AC104985.3-201ENST00000623479 597 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 BMS1P21-201ENST00000634565 365 ntBASIC3.82□□□□□ -1.8
CACNA1FO60840 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.82□□□□□ -1.8
CACNA1FO60840 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
CACNA1FO60840 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CACNA1FO60840 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CACNA1FO60840 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.81□□□□□ -1.8
CACNA1FO60840 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CACNA1FO60840 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CACNA1FO60840 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
CACNA1FO60840 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.81□□□□□ -1.8
CACNA1FO60840 ANKRD36P1-201ENST00000344424 659 ntBASIC3.81□□□□□ -1.8
CACNA1FO60840 SNORD116-9-201ENST00000384000 95 ntBASIC3.81□□□□□ -1.8
CACNA1FO60840 SNORD116-3-201ENST00000384287 95 ntBASIC3.81□□□□□ -1.8
CACNA1FO60840 SNORD116-7-201ENST00000384404 95 ntBASIC3.81□□□□□ -1.8
CACNA1FO60840 SNORD116-5-201ENST00000384462 95 ntBASIC3.81□□□□□ -1.8
CACNA1FO60840 MIR708-201ENST00000390708 88 ntBASIC3.81□□□□□ -1.8
CACNA1FO60840 AL138885.1-201ENST00000405921 675 ntBASIC3.81□□□□□ -1.8
CACNA1FO60840 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.81□□□□□ -1.8
CACNA1FO60840 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.81□□□□□ -1.8
CACNA1FO60840 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.81□□□□□ -1.8
CACNA1FO60840 AL008629.1-201ENST00000438615 184 ntBASIC3.81□□□□□ -1.8
CACNA1FO60840 RPS24P13-201ENST00000442520 397 ntBASIC3.81□□□□□ -1.8
CACNA1FO60840 PTENP1-201ENST00000447117 1215 ntBASIC3.81□□□□□ -1.8
CACNA1FO60840 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.81□□□□□ -1.8
CACNA1FO60840 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.81□□□□□ -1.8
CACNA1FO60840 AC021146.7-201ENST00000509604 775 ntBASIC3.81□□□□□ -1.8
CACNA1FO60840 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.81□□□□□ -1.8
CACNA1FO60840 AC119751.1-201ENST00000513357 765 ntBASIC3.81□□□□□ -1.8
CACNA1FO60840 RN7SKP60-201ENST00000516985 239 ntBASIC3.81□□□□□ -1.8
CACNA1FO60840 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.81□□□□□ -1.8
CACNA1FO60840 AC007424.1-203ENST00000554613 687 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms