Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 MIR6780A-201ENST00000615089 68 ntBASIC5.6□□□□□ -1.51
SMARCA5O60264 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
SMARCA5O60264 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
SMARCA5O60264 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SMARCA5O60264 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SMARCA5O60264 AP000542.2-201ENST00000623199 6179 ntBASIC5.6□□□□□ -1.51
SMARCA5O60264 AL031985.3-201ENST00000565390 2449 ntBASIC5.59□□□□□ -1.51
SMARCA5O60264 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.59□□□□□ -1.51
SMARCA5O60264 AL049780.3-201ENST00000624612 1583 ntBASIC5.59□□□□□ -1.51
SMARCA5O60264 AC092326.2-201ENST00000624772 1561 ntBASIC5.59□□□□□ -1.51
SMARCA5O60264 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SMARCA5O60264 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.59□□□□□ -1.51
SMARCA5O60264 AL365440.1-201ENST00000436135 2167 ntBASIC5.59□□□□□ -1.51
SMARCA5O60264 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SMARCA5O60264 AC079741.1-201ENST00000321498 212 ntBASIC5.59□□□□□ -1.51
SMARCA5O60264 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SMARCA5O60264 RNU6-1249P-201ENST00000363237 111 ntBASIC5.59□□□□□ -1.51
SMARCA5O60264 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SMARCA5O60264 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SMARCA5O60264 MIR585-201ENST00000384887 94 ntBASIC5.59□□□□□ -1.51
SMARCA5O60264 RNA5SP397-201ENST00000391323 118 ntBASIC5.59□□□□□ -1.51
SMARCA5O60264 FGF7P8-201ENST00000402994 292 ntBASIC5.59□□□□□ -1.51
SMARCA5O60264 SNRPFP1-201ENST00000414761 252 ntBASIC5.59□□□□□ -1.51
SMARCA5O60264 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SMARCA5O60264 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.59□□□□□ -1.51
SMARCA5O60264 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.59□□□□□ -1.51
SMARCA5O60264 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.59□□□□□ -1.51
SMARCA5O60264 AL512649.1-201ENST00000428997 581 ntBASIC5.59□□□□□ -1.51
SMARCA5O60264 USP9YP7-201ENST00000436723 430 ntBASIC5.59□□□□□ -1.51
SMARCA5O60264 AL022238.1-201ENST00000442557 355 ntBASIC5.59□□□□□ -1.51
SMARCA5O60264 HMGN2P21-201ENST00000447764 270 ntBASIC5.59□□□□□ -1.51
SMARCA5O60264 MTND3P10-201ENST00000450967 341 ntBASIC5.59□□□□□ -1.51
SMARCA5O60264 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SMARCA5O60264 USP9YP32-201ENST00000452432 430 ntBASIC5.59□□□□□ -1.51
SMARCA5O60264 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SMARCA5O60264 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.59□□□□□ -1.51
SMARCA5O60264 KLF3P2-201ENST00000465138 268 ntBASIC5.59□□□□□ -1.51
SMARCA5O60264 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.59□□□□□ -1.51
SMARCA5O60264 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.59□□□□□ -1.51
SMARCA5O60264 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC5.59□□□□□ -1.51
SMARCA5O60264 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.59□□□□□ -1.51
SMARCA5O60264 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC5.59□□□□□ -1.51
SMARCA5O60264 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.59□□□□□ -1.51
SMARCA5O60264 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC5.59□□□□□ -1.51
SMARCA5O60264 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.59□□□□□ -1.51
SMARCA5O60264 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.59□□□□□ -1.51
SMARCA5O60264 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.59□□□□□ -1.51
SMARCA5O60264 AP000860.1-201ENST00000605250 559 ntBASIC5.59□□□□□ -1.51
SMARCA5O60264 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
SMARCA5O60264 AL023881.1-201ENST00000621088 301 ntBASIC5.59□□□□□ -1.51
SMARCA5O60264 AP005264.7-201ENST00000625003 745 ntBASIC5.59□□□□□ -1.51
SMARCA5O60264 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.59□□□□□ -1.51
SMARCA5O60264 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SMARCA5O60264 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.59□□□□□ -1.52
SMARCA5O60264 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SMARCA5O60264 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.58□□□□□ -1.52
SMARCA5O60264 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMARCA5O60264 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.58□□□□□ -1.52
SMARCA5O60264 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SMARCA5O60264 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SMARCA5O60264 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SMARCA5O60264 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SMARCA5O60264 OR11H5P-202ENST00000641612 1325 ntBASIC5.58□□□□□ -1.52
SMARCA5O60264 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SMARCA5O60264 RNU6-181P-201ENST00000363225 107 ntBASIC5.58□□□□□ -1.52
SMARCA5O60264 RNU6-335P-201ENST00000364563 113 ntBASIC5.58□□□□□ -1.52
SMARCA5O60264 SNORA71.2-201ENST00000364941 134 ntBASIC5.58□□□□□ -1.52
SMARCA5O60264 RNU6-359P-201ENST00000365466 108 ntBASIC5.58□□□□□ -1.52
SMARCA5O60264 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
SMARCA5O60264 RNU1-63P-201ENST00000383902 164 ntBASIC5.58□□□□□ -1.52
SMARCA5O60264 RNU6-297P-201ENST00000384636 107 ntBASIC5.58□□□□□ -1.52
SMARCA5O60264 MIR195-201ENST00000385194 87 ntBASIC5.58□□□□□ -1.52
SMARCA5O60264 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.58□□□□□ -1.52
SMARCA5O60264 MIR921-201ENST00000401133 56 ntBASIC5.58□□□□□ -1.52
SMARCA5O60264 Z98745.1-201ENST00000402553 494 ntBASIC5.58□□□□□ -1.52
SMARCA5O60264 AL583834.1-201ENST00000406943 343 ntBASIC5.58□□□□□ -1.52
SMARCA5O60264 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SMARCA5O60264 RAD23BP1-201ENST00000421404 1227 ntBASIC5.58□□□□□ -1.52
SMARCA5O60264 RPL7AP25-201ENST00000423357 805 ntBASIC5.58□□□□□ -1.52
SMARCA5O60264 FAR2P4-202ENST00000425399 584 ntBASIC5.58□□□□□ -1.52
SMARCA5O60264 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SMARCA5O60264 AL365184.2-201ENST00000431139 435 ntBASIC5.58□□□□□ -1.52
SMARCA5O60264 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.58□□□□□ -1.52
SMARCA5O60264 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.58□□□□□ -1.52
SMARCA5O60264 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.58□□□□□ -1.52
SMARCA5O60264 RPL23AP43-201ENST00000446445 471 ntBASIC5.58□□□□□ -1.52
SMARCA5O60264 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.58□□□□□ -1.52
SMARCA5O60264 AL672167.3-201ENST00000465951 960 ntBASIC5.58□□□□□ -1.52
SMARCA5O60264 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
SMARCA5O60264 AC034222.1-201ENST00000494052 532 ntBASIC5.58□□□□□ -1.52
SMARCA5O60264 AC008628.2-201ENST00000502605 298 ntBASIC5.58□□□□□ -1.52
SMARCA5O60264 AC105252.1-201ENST00000503089 286 ntBASIC5.58□□□□□ -1.52
SMARCA5O60264 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.58□□□□□ -1.52
SMARCA5O60264 AC023141.12-201ENST00000512399 199 ntBASIC5.58□□□□□ -1.52
SMARCA5O60264 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.58□□□□□ -1.52
SMARCA5O60264 AC022483.1-201ENST00000514020 567 ntBASIC5.58□□□□□ -1.52
SMARCA5O60264 SNORA20.3-201ENST00000516880 132 ntBASIC5.58□□□□□ -1.52
SMARCA5O60264 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.58□□□□□ -1.52
SMARCA5O60264 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.58□□□□□ -1.52
SMARCA5O60264 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms