Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RNA5SP88-201ENST00000365560 109 ntBASIC3.67□□□□□ -1.82
SSX4O60224 RNA5SP283-201ENST00000365604 119 ntBASIC3.67□□□□□ -1.82
SSX4O60224 RNU6-723P-201ENST00000383973 107 ntBASIC3.67□□□□□ -1.82
SSX4O60224 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SSX4O60224 RNA5SP36-201ENST00000410197 133 ntBASIC3.67□□□□□ -1.82
SSX4O60224 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.67□□□□□ -1.82
SSX4O60224 AL161631.1-201ENST00000417933 486 ntBASIC3.67□□□□□ -1.82
SSX4O60224 MFSD13B-201ENST00000420133 1290 ntBASIC3.67□□□□□ -1.82
SSX4O60224 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.67□□□□□ -1.82
SSX4O60224 AL513174.1-201ENST00000423182 629 ntBASIC3.67□□□□□ -1.82
SSX4O60224 RPL7P2-201ENST00000427639 268 ntBASIC3.67□□□□□ -1.82
SSX4O60224 MUPP-201ENST00000438111 566 ntBASIC3.67□□□□□ -1.82
SSX4O60224 SNRPEP7-201ENST00000438350 220 ntBASIC3.67□□□□□ -1.82
SSX4O60224 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.67□□□□□ -1.82
SSX4O60224 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.67□□□□□ -1.82
SSX4O60224 RN7SL93P-201ENST00000463035 293 ntBASIC3.67□□□□□ -1.82
SSX4O60224 HMGB1P25-201ENST00000468402 607 ntBASIC3.67□□□□□ -1.82
SSX4O60224 AC023424.2-201ENST00000493479 777 ntBASIC3.67□□□□□ -1.82
SSX4O60224 AC104164.2-201ENST00000496953 495 ntBASIC3.67□□□□□ -1.82
SSX4O60224 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.67□□□□□ -1.82
SSX4O60224 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.67□□□□□ -1.82
SSX4O60224 RNA5SP216-201ENST00000516111 123 ntBASIC3.67□□□□□ -1.82
SSX4O60224 RNA5SP49-201ENST00000516450 115 ntBASIC3.67□□□□□ -1.82
SSX4O60224 RNU6-678P-201ENST00000516832 109 ntBASIC3.67□□□□□ -1.82
SSX4O60224 RNU6-232P-201ENST00000517144 64 ntBASIC3.67□□□□□ -1.82
SSX4O60224 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.67□□□□□ -1.82
SSX4O60224 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SSX4O60224 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
SSX4O60224 BBIP1P1-201ENST00000602999 279 ntBASIC3.67□□□□□ -1.82
SSX4O60224 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.67□□□□□ -1.82
SSX4O60224 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.67□□□□□ -1.82
SSX4O60224 AL357080.1-201ENST00000617394 239 ntBASIC3.67□□□□□ -1.82
SSX4O60224 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.67□□□□□ -1.82
SSX4O60224 MIR6891-201ENST00000618788 93 ntBASIC3.67□□□□□ -1.82
SSX4O60224 AL603755.1-201ENST00000619504 163 ntBASIC3.67□□□□□ -1.82
SSX4O60224 AC018755.4-201ENST00000619715 454 ntBASIC3.67□□□□□ -1.82
SSX4O60224 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.67□□□□□ -1.82
SSX4O60224 AL445264.1-201ENST00000621719 171 ntBASIC3.67□□□□□ -1.82
SSX4O60224 AC078883.4-201ENST00000623218 367 ntBASIC3.67□□□□□ -1.82
SSX4O60224 AC010608.2-201ENST00000624830 470 ntBASIC3.67□□□□□ -1.82
SSX4O60224 AL773545.4-201ENST00000637262 310 ntBASIC3.67□□□□□ -1.82
SSX4O60224 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.67□□□□□ -1.82
SSX4O60224 AL513478.4-201ENST00000641636 310 ntBASIC3.67□□□□□ -1.82
SSX4O60224 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SSX4O60224 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SSX4O60224 RPS4XP5-202ENST00000449995 1334 ntBASIC3.67□□□□□ -1.82
SSX4O60224 AC011477.1-204ENST00000623416 1325 ntBASIC3.67□□□□□ -1.82
SSX4O60224 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.67□□□□□ -1.82
SSX4O60224 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SSX4O60224 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.82
SSX4O60224 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.66□□□□□ -1.82
SSX4O60224 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSX4O60224 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSX4O60224 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSX4O60224 MIR372-201ENST00000362225 67 ntBASIC3.66□□□□□ -1.82
SSX4O60224 RNU6-289P-201ENST00000364093 107 ntBASIC3.66□□□□□ -1.82
SSX4O60224 Y_RNA.302-201ENST00000364997 102 ntBASIC3.66□□□□□ -1.82
SSX4O60224 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SSX4O60224 SNORD51-201ENST00000384320 80 ntBASIC3.66□□□□□ -1.82
SSX4O60224 RNU5A-2P-201ENST00000384337 116 ntBASIC3.66□□□□□ -1.82
SSX4O60224 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
SSX4O60224 HMGN2P8-201ENST00000391458 268 ntBASIC3.66□□□□□ -1.82
SSX4O60224 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.66□□□□□ -1.82
SSX4O60224 AC097374.1-203ENST00000400783 485 ntBASIC3.66□□□□□ -1.82
SSX4O60224 RPL36AP36-201ENST00000418616 301 ntBASIC3.66□□□□□ -1.82
SSX4O60224 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.66□□□□□ -1.82
SSX4O60224 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.66□□□□□ -1.82
SSX4O60224 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.66□□□□□ -1.82
SSX4O60224 AL365203.2-201ENST00000423444 196 ntBASIC3.66□□□□□ -1.82
SSX4O60224 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC3.66□□□□□ -1.82
SSX4O60224 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.66□□□□□ -1.82
SSX4O60224 AL365396.1-201ENST00000430854 671 ntBASIC3.66□□□□□ -1.82
SSX4O60224 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.66□□□□□ -1.82
SSX4O60224 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.66□□□□□ -1.82
SSX4O60224 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SSX4O60224 MTCYBP45-201ENST00000435243 565 ntBASIC3.66□□□□□ -1.82
SSX4O60224 AC002381.1-201ENST00000447049 280 ntBASIC3.66□□□□□ -1.82
SSX4O60224 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.66□□□□□ -1.82
SSX4O60224 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.66□□□□□ -1.82
SSX4O60224 MTCO3P16-201ENST00000454456 754 ntBASIC3.66□□□□□ -1.82
SSX4O60224 ANP32BP2-201ENST00000454525 545 ntBASIC3.66□□□□□ -1.82
SSX4O60224 RPS20P32-201ENST00000456044 356 ntBASIC3.66□□□□□ -1.82
SSX4O60224 HMGB3P30-201ENST00000457863 606 ntBASIC3.66□□□□□ -1.82
SSX4O60224 SNORA84-201ENST00000459229 133 ntBASIC3.66□□□□□ -1.82
SSX4O60224 RPL35AP15-201ENST00000468042 339 ntBASIC3.66□□□□□ -1.82
SSX4O60224 BZW1P2-201ENST00000473537 826 ntBASIC3.66□□□□□ -1.82
SSX4O60224 AC072039.1-201ENST00000477611 581 ntBASIC3.66□□□□□ -1.82
SSX4O60224 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.66□□□□□ -1.82
SSX4O60224 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.66□□□□□ -1.82
SSX4O60224 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.66□□□□□ -1.82
SSX4O60224 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.66□□□□□ -1.82
SSX4O60224 AC006390.1-201ENST00000508068 283 ntBASIC3.66□□□□□ -1.82
SSX4O60224 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.66□□□□□ -1.82
SSX4O60224 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SSX4O60224 KCTD9P2-201ENST00000512203 1013 ntBASIC3.66□□□□□ -1.82
SSX4O60224 RNU6-759P-201ENST00000516740 103 ntBASIC3.66□□□□□ -1.82
SSX4O60224 RNA5SP73-201ENST00000516744 108 ntBASIC3.66□□□□□ -1.82
SSX4O60224 AC008802.1-201ENST00000519121 791 ntBASIC3.66□□□□□ -1.82
SSX4O60224 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.66□□□□□ -1.82
SSX4O60224 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms