Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 USP9YP7-201ENST00000436723 430 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.11□□□□□ -1.75
SMAD6O43541 WASF1P1-201ENST00000447560 1131 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 NANOGNBP1-201ENST00000448444 480 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 COX6CP18-201ENST00000448769 222 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.11□□□□□ -1.75
SMAD6O43541 AC003071.1-201ENST00000451219 789 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 RPL23AP35-201ENST00000451906 501 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 USP9YP32-201ENST00000452432 430 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.11□□□□□ -1.75
SMAD6O43541 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.11□□□□□ -1.75
SMAD6O43541 AC004924.1-201ENST00000480160 781 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 RPS4XP15-201ENST00000489210 795 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 RPL29P14-201ENST00000495837 428 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.11□□□□□ -1.75
SMAD6O43541 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.11□□□□□ -1.75
SMAD6O43541 PRDX4P1-201ENST00000507189 574 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.11□□□□□ -1.75
SMAD6O43541 IFITM8P-201ENST00000522529 394 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.11□□□□□ -1.75
SMAD6O43541 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.11□□□□□ -1.75
SMAD6O43541 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.11□□□□□ -1.75
SMAD6O43541 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.11□□□□□ -1.75
SMAD6O43541 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.11□□□□□ -1.75
SMAD6O43541 BNIP3P5-201ENST00000562290 498 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 AC106785.1-201ENST00000565935 262 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 CYP4A43P-201ENST00000568156 121 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 AC115085.1-201ENST00000588924 229 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 AL356055.1-201ENST00000602528 446 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.11□□□□□ -1.75
SMAD6O43541 AC090970.3-201ENST00000612566 866 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 AC025253.1-201ENST00000613623 543 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 AC090517.2-201ENST00000614966 680 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 U4.5-201ENST00000617137 123 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SMAD6O43541 AP005264.7-201ENST00000625003 745 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 OR5AK4P-201ENST00000635912 903 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
SMAD6O43541 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SMAD6O43541 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.11□□□□□ -1.75
SMAD6O43541 GTF2H2B-203ENST00000508065 1432 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 AC097504.1-201ENST00000515103 2415 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 Z99496.1-201ENST00000469424 1477 ntBASIC4.11□□□□□ -1.75
SMAD6O43541 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.11□□□□□ -1.75
SMAD6O43541 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SMAD6O43541 PABPC1P9-201ENST00000426076 1612 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
SMAD6O43541 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SMAD6O43541 AL079343.1-201ENST00000572358 1771 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.1□□□□□ -1.75
SMAD6O43541 HMGB1P5-201ENST00000255320 642 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 AC016716.1-201ENST00000265882 708 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.1□□□□□ -1.75
SMAD6O43541 SNORA60-201ENST00000362396 134 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 RNU6-374P-201ENST00000364146 108 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 Y_RNA.302-201ENST00000364997 102 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 RNA5SP167-201ENST00000365461 116 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 RNU6-185P-201ENST00000384421 107 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.1□□□□□ -1.75
SMAD6O43541 CCDC58P2-201ENST00000417131 366 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 OR8F1P-201ENST00000425243 930 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 AL691449.1-201ENST00000426570 421 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 ISCA1P1-201ENST00000426679 387 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SMAD6O43541 RPL7P29-201ENST00000437151 728 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 AL353748.1-201ENST00000440753 474 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.1□□□□□ -1.75
SMAD6O43541 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.1□□□□□ -1.75
SMAD6O43541 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.1□□□□□ -1.75
SMAD6O43541 MTCO3P11-201ENST00000455103 774 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.1□□□□□ -1.75
SMAD6O43541 VPS26AP1-201ENST00000483197 979 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 AC106872.2-201ENST00000494303 480 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.1□□□□□ -1.75
SMAD6O43541 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.1□□□□□ -1.75
SMAD6O43541 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.1□□□□□ -1.75
SMAD6O43541 AC109471.1-201ENST00000511631 612 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 RNU6-506P-201ENST00000516553 94 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 OR5M7P-201ENST00000526140 972 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.1□□□□□ -1.75
SMAD6O43541 ADI1P3-201ENST00000549509 470 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.1□□□□□ -1.75
SMAD6O43541 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.1□□□□□ -1.75
SMAD6O43541 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.1□□□□□ -1.75
SMAD6O43541 AL451044.1-201ENST00000604867 238 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 AC016727.1-205ENST00000605437 569 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 AC004067.1-201ENST00000608733 700 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 AC105429.2-201ENST00000610567 517 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.1□□□□□ -1.75
SMAD6O43541 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
SMAD6O43541 OR5H6-203ENST00000642105 978 ntBASIC4.1□□□□□ -1.75
SMAD6O43541 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SMAD6O43541 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
SMAD6O43541 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms