Protein–RNA interactions for Protein: O43310

CTIF, CBP80/20-dependent translation initiation factor, humanhuman

Known RBP Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTIFO43310 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.37□□□□□ -1.71
CTIFO43310 AC073648.5-201ENST00000603502 305 ntBASIC4.37□□□□□ -1.71
CTIFO43310 AL133338.2-201ENST00000604292 736 ntBASIC4.37□□□□□ -1.71
CTIFO43310 AL354984.3-201ENST00000604803 325 ntBASIC4.37□□□□□ -1.71
CTIFO43310 AL513477.2-201ENST00000607858 568 ntBASIC4.37□□□□□ -1.71
CTIFO43310 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.37□□□□□ -1.71
CTIFO43310 AC103710.4-201ENST00000609301 899 ntBASIC4.37□□□□□ -1.71
CTIFO43310 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.37□□□□□ -1.71
CTIFO43310 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.37□□□□□ -1.71
CTIFO43310 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.37□□□□□ -1.71
CTIFO43310 AC009509.4-201ENST00000619202 509 ntBASIC4.37□□□□□ -1.71
CTIFO43310 MIR6853-201ENST00000619642 74 ntBASIC4.37□□□□□ -1.71
CTIFO43310 AC009318.4-201ENST00000620496 486 ntBASIC4.37□□□□□ -1.71
CTIFO43310 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.37□□□□□ -1.71
CTIFO43310 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
CTIFO43310 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTIFO43310 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CTIFO43310 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CTIFO43310 ENSAP1-201ENST00000392855 326 ntBASIC4.36□□□□□ -1.71
CTIFO43310 AL031679.1-201ENST00000400616 525 ntBASIC4.36□□□□□ -1.71
CTIFO43310 RNA5SP113-201ENST00000410486 84 ntBASIC4.36□□□□□ -1.71
CTIFO43310 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.36□□□□□ -1.71
CTIFO43310 RPL31P2-201ENST00000413849 377 ntBASIC4.36□□□□□ -1.71
CTIFO43310 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.36□□□□□ -1.71
CTIFO43310 BX510359.2-201ENST00000417920 305 ntBASIC4.36□□□□□ -1.71
CTIFO43310 RPS27AP7-201ENST00000422792 455 ntBASIC4.36□□□□□ -1.71
CTIFO43310 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.36□□□□□ -1.71
CTIFO43310 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.36□□□□□ -1.71
CTIFO43310 RPS29P31-201ENST00000446147 164 ntBASIC4.36□□□□□ -1.71
CTIFO43310 MTCO1P27-201ENST00000448269 226 ntBASIC4.36□□□□□ -1.71
CTIFO43310 BX276092.4-201ENST00000452056 248 ntBASIC4.36□□□□□ -1.71
CTIFO43310 AL513533.1-201ENST00000453728 415 ntBASIC4.36□□□□□ -1.71
CTIFO43310 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.36□□□□□ -1.71
CTIFO43310 RNU7-170P-201ENST00000459303 61 ntBASIC4.36□□□□□ -1.71
CTIFO43310 AC087385.1-201ENST00000475062 312 ntBASIC4.36□□□□□ -1.71
CTIFO43310 RPL7P24-201ENST00000493052 752 ntBASIC4.36□□□□□ -1.71
CTIFO43310 AC106872.3-201ENST00000495104 446 ntBASIC4.36□□□□□ -1.71
CTIFO43310 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.36□□□□□ -1.71
CTIFO43310 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.36□□□□□ -1.71
CTIFO43310 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.36□□□□□ -1.71
CTIFO43310 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.36□□□□□ -1.71
CTIFO43310 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.36□□□□□ -1.71
CTIFO43310 CBX3P3-201ENST00000508108 532 ntBASIC4.36□□□□□ -1.71
CTIFO43310 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.36□□□□□ -1.71
CTIFO43310 PGBD4P4-201ENST00000509673 613 ntBASIC4.36□□□□□ -1.71
CTIFO43310 AC079140.3-201ENST00000511111 550 ntBASIC4.36□□□□□ -1.71
CTIFO43310 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.36□□□□□ -1.71
CTIFO43310 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.36□□□□□ -1.71
CTIFO43310 RNU6-720P-201ENST00000516363 108 ntBASIC4.36□□□□□ -1.71
CTIFO43310 RN7SKP277-201ENST00000516895 283 ntBASIC4.36□□□□□ -1.71
CTIFO43310 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.36□□□□□ -1.71
CTIFO43310 AC022861.1-201ENST00000522981 663 ntBASIC4.36□□□□□ -1.71
CTIFO43310 AP004247.1-201ENST00000531556 1289 ntBASIC4.36□□□□□ -1.71
CTIFO43310 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CTIFO43310 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.36□□□□□ -1.71
CTIFO43310 OR6C7P-201ENST00000547875 934 ntBASIC4.36□□□□□ -1.71
CTIFO43310 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.36□□□□□ -1.71
CTIFO43310 CBX3P5-201ENST00000552017 521 ntBASIC4.36□□□□□ -1.71
CTIFO43310 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.36□□□□□ -1.71
CTIFO43310 AC007424.1-203ENST00000554613 687 ntBASIC4.36□□□□□ -1.71
CTIFO43310 AC068446.3-201ENST00000555285 382 ntBASIC4.36□□□□□ -1.71
CTIFO43310 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CTIFO43310 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.36□□□□□ -1.71
CTIFO43310 AC083760.1-201ENST00000589621 670 ntBASIC4.36□□□□□ -1.71
CTIFO43310 RPL23AP92-201ENST00000603609 255 ntBASIC4.36□□□□□ -1.71
CTIFO43310 AC112187.2-201ENST00000604345 283 ntBASIC4.36□□□□□ -1.71
CTIFO43310 AC087752.4-201ENST00000605911 462 ntBASIC4.36□□□□□ -1.71
CTIFO43310 AL592295.2-201ENST00000612578 206 ntBASIC4.36□□□□□ -1.71
CTIFO43310 AL359740.1-201ENST00000624340 592 ntBASIC4.36□□□□□ -1.71
CTIFO43310 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.36□□□□□ -1.71
CTIFO43310 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.36□□□□□ -1.71
CTIFO43310 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.36□□□□□ -1.71
CTIFO43310 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
CTIFO43310 AL022578.1-201ENST00000439330 1433 ntBASIC4.36□□□□□ -1.71
CTIFO43310 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CTIFO43310 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CTIFO43310 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTIFO43310 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CTIFO43310 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CTIFO43310 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CTIFO43310 Y_RNA.3-201ENST00000362331 103 ntBASIC4.35□□□□□ -1.71
CTIFO43310 RNU6-289P-201ENST00000364093 107 ntBASIC4.35□□□□□ -1.71
CTIFO43310 RNU6-398P-201ENST00000384143 109 ntBASIC4.35□□□□□ -1.71
CTIFO43310 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CTIFO43310 RNU6-952P-201ENST00000391164 108 ntBASIC4.35□□□□□ -1.71
CTIFO43310 RPS16P5-201ENST00000406501 404 ntBASIC4.35□□□□□ -1.71
CTIFO43310 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CTIFO43310 EIF4A1P3-201ENST00000411521 244 ntBASIC4.35□□□□□ -1.71
CTIFO43310 RPL17P12-201ENST00000413391 526 ntBASIC4.35□□□□□ -1.71
CTIFO43310 UBE2V1P10-201ENST00000414685 269 ntBASIC4.35□□□□□ -1.71
CTIFO43310 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.35□□□□□ -1.71
CTIFO43310 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.35□□□□□ -1.71
CTIFO43310 AL035410.1-201ENST00000427409 427 ntBASIC4.35□□□□□ -1.71
CTIFO43310 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.35□□□□□ -1.71
CTIFO43310 LSM1P1-201ENST00000438629 273 ntBASIC4.35□□□□□ -1.71
CTIFO43310 MTND5P14-201ENST00000441481 1267 ntBASIC4.35□□□□□ -1.71
CTIFO43310 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.35□□□□□ -1.71
CTIFO43310 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.35□□□□□ -1.71
CTIFO43310 ST13P20-201ENST00000447996 1065 ntBASIC4.35□□□□□ -1.71
CTIFO43310 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms