Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 MIR4443-201ENST00000585052 53 ntBASIC4.43□□□□□ -1.7
PHGDHO43175 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.43□□□□□ -1.7
PHGDHO43175 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.43□□□□□ -1.7
PHGDHO43175 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.43□□□□□ -1.7
PHGDHO43175 AL031176.1-201ENST00000604554 466 ntBASIC4.43□□□□□ -1.7
PHGDHO43175 AC121334.2-201ENST00000605387 271 ntBASIC4.43□□□□□ -1.7
PHGDHO43175 HMGN2P28-201ENST00000606102 262 ntBASIC4.43□□□□□ -1.7
PHGDHO43175 AL158196.1-201ENST00000616786 434 ntBASIC4.43□□□□□ -1.7
PHGDHO43175 AC072046.2-201ENST00000618366 268 ntBASIC4.43□□□□□ -1.7
PHGDHO43175 MIR7154-201ENST00000620673 73 ntBASIC4.43□□□□□ -1.7
PHGDHO43175 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PHGDHO43175 PISRT1-201ENST00000626175 531 ntBASIC4.43□□□□□ -1.7
PHGDHO43175 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.43□□□□□ -1.7
PHGDHO43175 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
PHGDHO43175 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PHGDHO43175 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PHGDHO43175 AC009902.3-201ENST00000606235 2172 ntBASIC4.43□□□□□ -1.7
PHGDHO43175 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
PHGDHO43175 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.42□□□□□ -1.7
PHGDHO43175 FARSBP1-201ENST00000435808 1778 ntBASIC4.42□□□□□ -1.7
PHGDHO43175 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PHGDHO43175 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
PHGDHO43175 GNG5P1-201ENST00000255500 204 ntBASIC4.42□□□□□ -1.7
PHGDHO43175 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.42□□□□□ -1.7
PHGDHO43175 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.42□□□□□ -1.7
PHGDHO43175 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PHGDHO43175 Y_RNA.582-201ENST00000391023 95 ntBASIC4.42□□□□□ -1.7
PHGDHO43175 MRPL42P2-201ENST00000403169 426 ntBASIC4.42□□□□□ -1.7
PHGDHO43175 RN7SKP106-201ENST00000410832 272 ntBASIC4.42□□□□□ -1.7
PHGDHO43175 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.42□□□□□ -1.7
PHGDHO43175 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
PHGDHO43175 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.42□□□□□ -1.7
PHGDHO43175 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.42□□□□□ -1.7
PHGDHO43175 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.42□□□□□ -1.7
PHGDHO43175 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.42□□□□□ -1.7
PHGDHO43175 RPS27AP17-201ENST00000463344 455 ntBASIC4.42□□□□□ -1.7
PHGDHO43175 RPL5P30-201ENST00000465511 891 ntBASIC4.42□□□□□ -1.7
PHGDHO43175 TMED11P-201ENST00000479478 690 ntBASIC4.42□□□□□ -1.7
PHGDHO43175 IGLV2-34-201ENST00000490007 283 ntBASIC4.42□□□□□ -1.7
PHGDHO43175 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.42□□□□□ -1.7
PHGDHO43175 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.42□□□□□ -1.7
PHGDHO43175 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.42□□□□□ -1.7
PHGDHO43175 Y_RNA.672-201ENST00000516289 104 ntBASIC4.42□□□□□ -1.7
PHGDHO43175 RNU2-46P-201ENST00000517038 113 ntBASIC4.42□□□□□ -1.7
PHGDHO43175 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.42□□□□□ -1.7
PHGDHO43175 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PHGDHO43175 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.42□□□□□ -1.7
PHGDHO43175 CR383656.7-201ENST00000548164 174 ntBASIC4.42□□□□□ -1.7
PHGDHO43175 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.42□□□□□ -1.7
PHGDHO43175 AL356432.3-201ENST00000568952 465 ntBASIC4.42□□□□□ -1.7
PHGDHO43175 AL121834.1-201ENST00000572284 509 ntBASIC4.42□□□□□ -1.7
PHGDHO43175 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.42□□□□□ -1.7
PHGDHO43175 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.42□□□□□ -1.7
PHGDHO43175 AC108747.1-201ENST00000609508 535 ntBASIC4.42□□□□□ -1.7
PHGDHO43175 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.42□□□□□ -1.7
PHGDHO43175 AL355472.4-201ENST00000610233 626 ntBASIC4.42□□□□□ -1.7
PHGDHO43175 AC012150.2-201ENST00000621300 544 ntBASIC4.42□□□□□ -1.7
PHGDHO43175 AL356585.4-201ENST00000623078 1229 ntBASIC4.42□□□□□ -1.7
PHGDHO43175 AC006065.6-201ENST00000625201 545 ntBASIC4.42□□□□□ -1.7
PHGDHO43175 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PHGDHO43175 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PHGDHO43175 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PHGDHO43175 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
PHGDHO43175 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PHGDHO43175 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.41□□□□□ -1.7
PHGDHO43175 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PHGDHO43175 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.41□□□□□ -1.7
PHGDHO43175 AC244517.1-201ENST00000606030 2086 ntBASIC4.41□□□□□ -1.7
PHGDHO43175 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PHGDHO43175 RNA5SP307-201ENST00000362863 116 ntBASIC4.41□□□□□ -1.7
PHGDHO43175 U8.3-201ENST00000363321 132 ntBASIC4.41□□□□□ -1.7
PHGDHO43175 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
PHGDHO43175 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
PHGDHO43175 RNU11-4P-201ENST00000391149 133 ntBASIC4.41□□□□□ -1.7
PHGDHO43175 RPS20P14-201ENST00000412545 360 ntBASIC4.41□□□□□ -1.7
PHGDHO43175 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.41□□□□□ -1.7
PHGDHO43175 ELOCP17-201ENST00000414751 326 ntBASIC4.41□□□□□ -1.7
PHGDHO43175 SNRPFP1-201ENST00000414761 252 ntBASIC4.41□□□□□ -1.7
PHGDHO43175 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PHGDHO43175 OR2B8P-201ENST00000432841 938 ntBASIC4.41□□□□□ -1.7
PHGDHO43175 AL049745.1-201ENST00000433953 286 ntBASIC4.41□□□□□ -1.7
PHGDHO43175 AC009961.2-201ENST00000435771 251 ntBASIC4.41□□□□□ -1.7
PHGDHO43175 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.41□□□□□ -1.7
PHGDHO43175 ARPC3P1-201ENST00000437218 533 ntBASIC4.41□□□□□ -1.7
PHGDHO43175 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.41□□□□□ -1.7
PHGDHO43175 AL772161.1-201ENST00000439130 476 ntBASIC4.41□□□□□ -1.7
PHGDHO43175 RPL12P3-201ENST00000440080 396 ntBASIC4.41□□□□□ -1.7
PHGDHO43175 AL049734.2-201ENST00000441066 616 ntBASIC4.41□□□□□ -1.7
PHGDHO43175 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.41□□□□□ -1.7
PHGDHO43175 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.41□□□□□ -1.7
PHGDHO43175 NANOGNBP1-201ENST00000448444 480 ntBASIC4.41□□□□□ -1.7
PHGDHO43175 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.41□□□□□ -1.7
PHGDHO43175 NDUFAF4P4-201ENST00000454883 502 ntBASIC4.41□□□□□ -1.7
PHGDHO43175 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.41□□□□□ -1.7
PHGDHO43175 SNORD108-201ENST00000459332 71 ntBASIC4.41□□□□□ -1.7
PHGDHO43175 AC006967.1-201ENST00000467608 589 ntBASIC4.41□□□□□ -1.7
PHGDHO43175 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.41□□□□□ -1.7
PHGDHO43175 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.41□□□□□ -1.7
PHGDHO43175 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.41□□□□□ -1.7
PHGDHO43175 AL117351.2-201ENST00000513571 157 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms