Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.11□□□□□ -1.91
CLOCKO15516 AC092641.1-201ENST00000440229 772 ntBASIC3.11□□□□□ -1.91
CLOCKO15516 RPL7P59-201ENST00000447700 943 ntBASIC3.11□□□□□ -1.91
CLOCKO15516 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.11□□□□□ -1.91
CLOCKO15516 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.11□□□□□ -1.91
CLOCKO15516 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.11□□□□□ -1.91
CLOCKO15516 RPL21P8-201ENST00000465083 535 ntBASIC3.11□□□□□ -1.91
CLOCKO15516 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.11□□□□□ -1.91
CLOCKO15516 ST13P14-201ENST00000474095 734 ntBASIC3.11□□□□□ -1.91
CLOCKO15516 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.11□□□□□ -1.91
CLOCKO15516 AC011352.3-201ENST00000505162 593 ntBASIC3.11□□□□□ -1.91
CLOCKO15516 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.11□□□□□ -1.91
CLOCKO15516 AC112518.2-201ENST00000508565 425 ntBASIC3.11□□□□□ -1.91
CLOCKO15516 AC004062.1-201ENST00000509926 645 ntBASIC3.11□□□□□ -1.91
CLOCKO15516 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.11□□□□□ -1.91
CLOCKO15516 OR8K2P-201ENST00000524645 927 ntBASIC3.11□□□□□ -1.91
CLOCKO15516 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.11□□□□□ -1.91
CLOCKO15516 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.11□□□□□ -1.91
CLOCKO15516 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.11□□□□□ -1.91
CLOCKO15516 AC011611.1-201ENST00000552179 197 ntBASIC3.11□□□□□ -1.91
CLOCKO15516 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.11□□□□□ -1.91
CLOCKO15516 MIR4474-201ENST00000579189 78 ntBASIC3.11□□□□□ -1.91
CLOCKO15516 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.11□□□□□ -1.91
CLOCKO15516 AC078899.3-201ENST00000599065 212 ntBASIC3.11□□□□□ -1.91
CLOCKO15516 AC128687.1-201ENST00000605304 619 ntBASIC3.11□□□□□ -1.91
CLOCKO15516 MIR8084-201ENST00000614105 89 ntBASIC3.11□□□□□ -1.91
CLOCKO15516 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.11□□□□□ -1.91
CLOCKO15516 MIR7975-201ENST00000619350 68 ntBASIC3.11□□□□□ -1.91
CLOCKO15516 AC092650.2-201ENST00000619984 902 ntBASIC3.11□□□□□ -1.91
CLOCKO15516 SNORD39.4-201ENST00000620099 78 ntBASIC3.11□□□□□ -1.91
CLOCKO15516 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.11□□□□□ -1.91
CLOCKO15516 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.11□□□□□ -1.91
CLOCKO15516 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.11□□□□□ -1.91
CLOCKO15516 MTND2P41-201ENST00000637599 773 ntBASIC3.11□□□□□ -1.91
CLOCKO15516 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.11□□□□□ -1.91
CLOCKO15516 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLOCKO15516 ZNF849P-201ENST00000594711 1566 ntBASIC3.11□□□□□ -1.91
CLOCKO15516 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.11□□□□□ -1.91
CLOCKO15516 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.11□□□□□ -1.91
CLOCKO15516 AC130650.2-201ENST00000618736 2403 ntBASIC3.11□□□□□ -1.91
CLOCKO15516 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLOCKO15516 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.1□□□□□ -1.91
CLOCKO15516 MTND5P19-201ENST00000424872 1794 ntBASIC3.1□□□□□ -1.91
CLOCKO15516 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CLOCKO15516 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.1□□□□□ -1.91
CLOCKO15516 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.1□□□□□ -1.91
CLOCKO15516 MIR491-201ENST00000384877 84 ntBASIC3.1□□□□□ -1.91
CLOCKO15516 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CLOCKO15516 RPL5P18-201ENST00000406671 891 ntBASIC3.1□□□□□ -1.91
CLOCKO15516 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.1□□□□□ -1.91
CLOCKO15516 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.1□□□□□ -1.91
CLOCKO15516 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.1□□□□□ -1.91
CLOCKO15516 OR2AS1P-201ENST00000427827 319 ntBASIC3.1□□□□□ -1.91
CLOCKO15516 CYCSP4-201ENST00000429682 331 ntBASIC3.1□□□□□ -1.91
CLOCKO15516 snoU13.4-201ENST00000458916 104 ntBASIC3.1□□□□□ -1.91
CLOCKO15516 AL136126.1-201ENST00000473603 402 ntBASIC3.1□□□□□ -1.91
CLOCKO15516 AC025518.1-201ENST00000479856 347 ntBASIC3.1□□□□□ -1.91
CLOCKO15516 RPL32P34-201ENST00000486380 400 ntBASIC3.1□□□□□ -1.91
CLOCKO15516 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.1□□□□□ -1.91
CLOCKO15516 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.1□□□□□ -1.91
CLOCKO15516 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.1□□□□□ -1.91
CLOCKO15516 AC007536.1-201ENST00000533382 349 ntBASIC3.1□□□□□ -1.91
CLOCKO15516 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLOCKO15516 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.1□□□□□ -1.91
CLOCKO15516 AC087481.2-201ENST00000565492 330 ntBASIC3.1□□□□□ -1.91
CLOCKO15516 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.1□□□□□ -1.91
CLOCKO15516 AC015917.1-201ENST00000579654 510 ntBASIC3.1□□□□□ -1.91
CLOCKO15516 AC124283.4-201ENST00000581815 456 ntBASIC3.1□□□□□ -1.91
CLOCKO15516 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.1□□□□□ -1.91
CLOCKO15516 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.1□□□□□ -1.91
CLOCKO15516 AL591516.1-201ENST00000611326 274 ntBASIC3.1□□□□□ -1.91
CLOCKO15516 uc_338.1-201ENST00000612113 180 ntBASIC3.1□□□□□ -1.91
CLOCKO15516 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.1□□□□□ -1.91
CLOCKO15516 AC091948.2-201ENST00000636510 279 ntBASIC3.1□□□□□ -1.91
CLOCKO15516 AL590396.4-201ENST00000636779 956 ntBASIC3.1□□□□□ -1.91
CLOCKO15516 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.1□□□□□ -1.91
CLOCKO15516 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.1□□□□□ -1.91
CLOCKO15516 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.1□□□□□ -1.91
CLOCKO15516 API5P2-201ENST00000397055 1498 ntBASIC3.09□□□□□ -1.91
CLOCKO15516 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.09□□□□□ -1.91
CLOCKO15516 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.09□□□□□ -1.91
CLOCKO15516 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CLOCKO15516 AL645937.1-201ENST00000641739 1652 ntBASIC3.09□□□□□ -1.91
CLOCKO15516 RNU6-525P-201ENST00000363685 104 ntBASIC3.09□□□□□ -1.91
CLOCKO15516 SNORA51.4-201ENST00000364993 124 ntBASIC3.09□□□□□ -1.91
CLOCKO15516 MIR483-201ENST00000385070 76 ntBASIC3.09□□□□□ -1.91
CLOCKO15516 RNU6-821P-201ENST00000390995 107 ntBASIC3.09□□□□□ -1.91
CLOCKO15516 SAR1AP2-201ENST00000392696 594 ntBASIC3.09□□□□□ -1.91
CLOCKO15516 RNU4-65P-201ENST00000410473 140 ntBASIC3.09□□□□□ -1.91
CLOCKO15516 RNA5SP344-201ENST00000411081 104 ntBASIC3.09□□□□□ -1.91
CLOCKO15516 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLOCKO15516 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.09□□□□□ -1.91
CLOCKO15516 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CLOCKO15516 AL035410.1-201ENST00000427409 427 ntBASIC3.09□□□□□ -1.91
CLOCKO15516 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.09□□□□□ -1.91
CLOCKO15516 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.09□□□□□ -1.91
CLOCKO15516 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.09□□□□□ -1.91
CLOCKO15516 RPL26P28-201ENST00000451325 435 ntBASIC3.09□□□□□ -1.91
CLOCKO15516 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.09□□□□□ -1.91
CLOCKO15516 AC078857.1-201ENST00000469870 667 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms