Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 GSTM3P2-201ENST00000412746 530 ntBASIC4.92□□□□□ -1.62
FOXN1O15353 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.92□□□□□ -1.62
FOXN1O15353 AC093716.1-201ENST00000435923 377 ntBASIC4.92□□□□□ -1.62
FOXN1O15353 AC234064.1-201ENST00000436312 247 ntBASIC4.92□□□□□ -1.62
FOXN1O15353 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.92□□□□□ -1.62
FOXN1O15353 MTCO2P25-201ENST00000447065 681 ntBASIC4.92□□□□□ -1.62
FOXN1O15353 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
FOXN1O15353 AC098824.1-201ENST00000453565 980 ntBASIC4.92□□□□□ -1.62
FOXN1O15353 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.92□□□□□ -1.62
FOXN1O15353 RPL35AP15-201ENST00000468042 339 ntBASIC4.92□□□□□ -1.62
FOXN1O15353 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.92□□□□□ -1.62
FOXN1O15353 HSPD1P15-201ENST00000505573 1122 ntBASIC4.92□□□□□ -1.62
FOXN1O15353 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.92□□□□□ -1.62
FOXN1O15353 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.92□□□□□ -1.62
FOXN1O15353 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.92□□□□□ -1.62
FOXN1O15353 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.92□□□□□ -1.62
FOXN1O15353 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
FOXN1O15353 AC005832.3-201ENST00000537929 631 ntBASIC4.92□□□□□ -1.62
FOXN1O15353 OR7K1P-201ENST00000546439 926 ntBASIC4.92□□□□□ -1.62
FOXN1O15353 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.92□□□□□ -1.62
FOXN1O15353 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.92□□□□□ -1.62
FOXN1O15353 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.92□□□□□ -1.62
FOXN1O15353 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.92□□□□□ -1.62
FOXN1O15353 ATP5F1P7-201ENST00000567330 760 ntBASIC4.92□□□□□ -1.62
FOXN1O15353 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.92□□□□□ -1.62
FOXN1O15353 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.92□□□□□ -1.62
FOXN1O15353 MIR548AB-201ENST00000584917 84 ntBASIC4.92□□□□□ -1.62
FOXN1O15353 AC006272.2-201ENST00000594725 163 ntBASIC4.92□□□□□ -1.62
FOXN1O15353 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.92□□□□□ -1.62
FOXN1O15353 AC098614.4-201ENST00000607601 462 ntBASIC4.92□□□□□ -1.62
FOXN1O15353 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
FOXN1O15353 AC023158.2-201ENST00000614876 543 ntBASIC4.92□□□□□ -1.62
FOXN1O15353 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.92□□□□□ -1.62
FOXN1O15353 LRRC77P-213ENST00000637727 880 ntBASIC4.92□□□□□ -1.62
FOXN1O15353 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.92□□□□□ -1.62
FOXN1O15353 PABPC1P9-201ENST00000426076 1612 ntBASIC4.92□□□□□ -1.62
FOXN1O15353 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
FOXN1O15353 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
FOXN1O15353 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
FOXN1O15353 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
FOXN1O15353 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
FOXN1O15353 MTCO1P7-201ENST00000419523 1542 ntBASIC4.92□□□□□ -1.62
FOXN1O15353 VPS35P1-201ENST00000563400 1518 ntBASIC4.92□□□□□ -1.62
FOXN1O15353 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
FOXN1O15353 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.91□□□□□ -1.62
FOXN1O15353 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.91□□□□□ -1.62
FOXN1O15353 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.91□□□□□ -1.62
FOXN1O15353 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
FOXN1O15353 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
FOXN1O15353 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.91□□□□□ -1.62
FOXN1O15353 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
FOXN1O15353 CBX3P1-201ENST00000325243 554 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 RNU1-15P-201ENST00000353977 144 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 Y_RNA.38-201ENST00000362617 102 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
FOXN1O15353 RNU5A-6P-201ENST00000384136 116 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 Y_RNA.450-201ENST00000384198 113 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 RNU6-729P-201ENST00000384399 107 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 RNU6-876P-201ENST00000391295 104 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
FOXN1O15353 CIR1P3-201ENST00000405137 479 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 RPL23AP39-201ENST00000415533 405 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 RPL7P44-201ENST00000424827 742 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 OR4F13P-201ENST00000428478 931 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 AL512649.1-201ENST00000428997 581 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.91□□□□□ -1.62
FOXN1O15353 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.91□□□□□ -1.62
FOXN1O15353 HLA-N-201ENST00000437516 135 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 AC092427.1-201ENST00000439177 601 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 AL512286.1-201ENST00000439244 400 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.91□□□□□ -1.62
FOXN1O15353 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC4.91□□□□□ -1.62
FOXN1O15353 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.91□□□□□ -1.62
FOXN1O15353 GDI2P2-201ENST00000445131 608 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 GEMIN8P3-201ENST00000445417 720 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.91□□□□□ -1.62
FOXN1O15353 HMGB1P16-201ENST00000447155 540 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 AC104306.1-201ENST00000449702 371 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 PSMC1P13-201ENST00000458195 985 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 MTND1P16-201ENST00000465177 898 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 RPL7P22-201ENST00000466005 733 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 AC017015.1-201ENST00000477387 286 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.91□□□□□ -1.62
FOXN1O15353 AC022483.1-201ENST00000514020 567 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 AC093853.1-201ENST00000515689 483 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 RNA5SP497-201ENST00000516081 97 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.91□□□□□ -1.62
FOXN1O15353 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.91□□□□□ -1.62
FOXN1O15353 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.91□□□□□ -1.62
FOXN1O15353 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.91□□□□□ -1.62
FOXN1O15353 AC124068.1-201ENST00000563131 678 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 MTND6P33-201ENST00000571794 183 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 AL592436.1-201ENST00000605135 558 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 AL354760.1-201ENST00000608357 643 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 MIR6715A-201ENST00000615929 79 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.91□□□□□ -1.62
FOXN1O15353 AC069209.1-201ENST00000619282 651 ntBASIC4.91□□□□□ -1.62
FOXN1O15353 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.91□□□□□ -1.62
FOXN1O15353 FER-210ENST00000628534 558 ntTSL 5 BASIC4.91□□□□□ -1.62
FOXN1O15353 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms