Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC023050.1-201ENST00000498198 304 ntBASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 RNA5SP385-201ENST00000515947 110 ntBASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 RN7SKP82-201ENST00000516786 223 ntBASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 POLR2KP1-201ENST00000553226 168 ntBASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC008507.2-201ENST00000588402 1176 ntBASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 AP003117.1-201ENST00000602771 554 ntBASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC011458.1-201ENST00000604034 617 ntBASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL391834.2-201ENST00000609982 546 ntBASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC018926.1-201ENST00000616335 435 ntBASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC092184.1-201ENST00000625042 715 ntBASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC084035.1-201ENST00000634543 607 ntBASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC132825.7-201ENST00000638744 335 ntBASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC009487.2-201ENST00000420969 6821 ntBASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TMX2-CTNND1H3BSU7 MTND5P19-201ENST00000424872 1794 ntBASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL353743.4-201ENST00000422653 1547 ntBASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC096656.1-201ENST00000623826 1364 ntBASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 AP002784.2-201ENST00000397300 549 ntBASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 ARF4P3-201ENST00000397387 509 ntBASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 AP000567.1-201ENST00000406413 156 ntBASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 MIR1289-1-201ENST00000408836 144 ntBASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 TRIAP1P1-201ENST00000427062 225 ntBASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 RPS7P5-201ENST00000441482 581 ntBASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 FCF1P6-201ENST00000456841 595 ntBASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 RPL7P5-201ENST00000471472 736 ntBASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC068724.1-201ENST00000487100 792 ntBASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC096576.1-201ENST00000489014 359 ntBASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC008565.1-201ENST00000509046 885 ntBASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC008494.2-201ENST00000514544 370 ntBASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 MIR2682-201ENST00000580305 110 ntBASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 BNIP3P27-201ENST00000599991 412 ntBASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC112503.1-201ENST00000608436 391 ntBASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC099778.2-201ENST00000610904 211 ntBASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 CYCSP41-201ENST00000616920 296 ntBASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC126544.2-201ENST00000625174 749 ntBASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL356118.1-201ENST00000635272 1078 ntBASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 MTND5P24-201ENST00000438892 1767 ntBASIC3.05□□□□□ -1.92
TMX2-CTNND1H3BSU7 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 MTND4P9-201ENST00000507819 1346 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC104446.1-201ENST00000613728 1321 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 RNU5B-4P-201ENST00000363508 111 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 MIR122-201ENST00000385044 85 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL355615.1-201ENST00000406187 641 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 MIR1303-201ENST00000408625 86 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 UBE2V1P11-201ENST00000411559 285 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL139281.1-201ENST00000422120 335 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 NPM1P24-201ENST00000428039 894 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC022018.1-201ENST00000430685 241 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 CST9LP2-201ENST00000437612 320 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 HSFY3P-201ENST00000444242 1191 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL050341.1-201ENST00000447743 313 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 Z99127.3-201ENST00000448158 395 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC112492.1-201ENST00000449607 712 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL035407.2-201ENST00000454090 378 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 RPS17P11-201ENST00000474297 293 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC080014.1-201ENST00000496877 1201 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 RN7SKP272-201ENST00000516988 232 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 RPL12P22-201ENST00000519073 490 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 AL121603.1-201ENST00000553815 142 ntBASIC3.04□□□□□ -1.92
TMX2-CTNND1H3BSU7 AC010735.1-201ENST00000567305 1026 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms