Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 Y_RNA.408-201ENST00000383987 102 ntBASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 RNU6-356P-201ENST00000384140 107 ntBASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 AC004987.3-201ENST00000413879 771 ntBASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 AC008065.1-201ENST00000428525 348 ntBASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 YWHAZP8-201ENST00000436935 731 ntBASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 PTGES3P1-201ENST00000439531 483 ntBASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 UBE2V1P5-201ENST00000440070 405 ntBASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 MTND1P33-201ENST00000446251 917 ntBASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 PDSS1P2-201ENST00000449397 678 ntBASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 RPL21P41-201ENST00000459863 264 ntBASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 RPL37P6-202ENST00000464216 403 ntBASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 AC008155.2-201ENST00000464337 397 ntBASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 AC146507.1-201ENST00000468335 354 ntBASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 AC015724.1-201ENST00000478577 156 ntBASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 AC108729.1-201ENST00000487812 947 ntBASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 AC134050.1-201ENST00000495088 933 ntBASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 AC020699.1-201ENST00000505161 445 ntBASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 AC008494.2-201ENST00000514544 370 ntBASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 POLR2KP1-201ENST00000553226 168 ntBASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 AC090888.2-201ENST00000559765 1144 ntBASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 AC027104.1-201ENST00000563702 681 ntBASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 AC112220.2-201ENST00000605513 533 ntBASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 AP000238.1-201ENST00000608759 426 ntBASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 PART1_2.1-201ENST00000612397 250 ntBASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 AL121895.2-201ENST00000619558 447 ntBASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.07□□□□□ -1.92
TRIM49D1C9J1S8 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 RNU1-33P-201ENST00000364249 162 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 RNA5SP189-201ENST00000364920 115 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 SNORD67-201ENST00000390833 111 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 AL357075.1-201ENST00000404107 726 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 SNORA11C-201ENST00000408532 129 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 RNU6-77P-201ENST00000410554 91 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 RPS7P9-201ENST00000414704 586 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 BMS1P22-201ENST00000414726 313 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 PAICSP7-201ENST00000419829 962 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 AC092648.1-201ENST00000425870 423 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 YME1L1P1-201ENST00000429435 297 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 OR2B8P-201ENST00000432841 938 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 AC005019.1-201ENST00000436455 431 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 NAP1L1P3-201ENST00000462291 880 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 RPL21P10-201ENST00000463521 490 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 RPL7P23-201ENST00000493874 747 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 MTCYBP35-201ENST00000503630 1137 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 AC091951.3-201ENST00000504093 246 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 AC008837.1-201ENST00000511513 412 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 AC010376.1-201ENST00000522101 334 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 IGHV3-76-201ENST00000522465 295 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 AL132857.1-201ENST00000555180 708 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 AC090751.1-201ENST00000566966 267 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 AC095057.3-201ENST00000567102 1157 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 CKS1BP3-201ENST00000600888 237 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 AC024220.1-201ENST00000603675 484 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 AL583856.2-201ENST00000606298 543 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.06□□□□□ -1.92
TRIM49D1C9J1S8 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 SEC63P2-201ENST00000503863 1939 ntBASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 AC108206.1-201ENST00000570186 4159 ntBASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.05□□□□□ -1.92
TRIM49D1C9J1S8 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms