Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 RNU4-55P-201ENST00000410731 137 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 TMSB10P2-201ENST00000416049 131 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 AC104850.1-201ENST00000435940 476 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 AL451074.3-201ENST00000437709 472 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 MTATP6P23-201ENST00000440153 476 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 MTATP6P30-201ENST00000443540 664 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 RN7SL98P-201ENST00000462271 300 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 AL121769.1-201ENST00000469473 401 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 RPS27AP1-201ENST00000475545 471 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 AC041039.1-201ENST00000485656 536 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 RPS4XP18-201ENST00000495480 763 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 AL139099.1-201ENST00000497398 403 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 AC010493.1-201ENST00000513479 292 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 RN7SKP67-201ENST00000515905 235 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 RN7SKP116-201ENST00000516902 319 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 AL845331.3-202ENST00000562856 261 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 AC234778.2-201ENST00000566241 354 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 AC099489.2-201ENST00000574976 260 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 AC060771.1-201ENST00000582031 164 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 AC011626.1-201ENST00000604710 562 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 AL451044.1-201ENST00000604867 238 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 AL391813.2-201ENST00000609113 322 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 AC004944.1-201ENST00000517807 3059 ntBASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
CCDC85CA6NKD9 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 RNU5E-1-201ENST00000362477 120 ntBASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 AC068533.1-201ENST00000418542 415 ntBASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 AC092832.1-201ENST00000422934 400 ntBASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 MTND1P2-201ENST00000430604 821 ntBASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 RPL31P35-201ENST00000431058 377 ntBASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 MTCO2P11-201ENST00000431069 680 ntBASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 AL139415.2-201ENST00000431968 163 ntBASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 ZFRP1-201ENST00000457579 2970 ntBASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 SNORD125-201ENST00000459538 96 ntBASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 RPL38P1-201ENST00000460914 211 ntBASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 PGBD4P4-201ENST00000509673 613 ntBASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 RNU6-718P-201ENST00000516166 105 ntBASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 FAM92A1P1-201ENST00000528023 890 ntBASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 AP000907.2-201ENST00000530827 353 ntBASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 AC068790.3-201ENST00000602988 553 ntBASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 MIR6867-201ENST00000610636 67 ntBASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 AL138713.1-201ENST00000624026 2130 ntBASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 AC090337.1-201ENST00000579651 2074 ntBASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 AC004520.1-201ENST00000608362 1413 ntBASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 AC068769.1-201ENST00000474767 2426 ntBASIC5.31□□□□□ -1.56
CCDC85CA6NKD9 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC85CA6NKD9 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms