Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 AC091515.1-201ENST00000548110 679 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 MTND3P12-201ENST00000559068 328 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 AC008739.3-201ENST00000603262 127 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 AL162713.1-201ENST00000604480 262 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 SNORA51-201ENST00000606420 132 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 AL391261.4-201ENST00000616012 481 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 AL158163.2-201ENST00000619110 700 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 AC004777.1-201ENST00000624317 287 ntBASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TRIM49BA6NDI0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 AP001148.1-201ENST00000624124 2359 ntBASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 Y_RNA.493-201ENST00000384422 102 ntBASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 RPL31P1-201ENST00000398116 372 ntBASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 AC092648.1-201ENST00000425870 423 ntBASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 MTCYBP15-201ENST00000433123 1127 ntBASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 CST9LP2-201ENST00000437612 320 ntBASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 Z99714.1-201ENST00000450463 807 ntBASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 snoU13.3-201ENST00000459441 104 ntBASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 NAP1L1P3-201ENST00000462291 880 ntBASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 AC008155.2-201ENST00000464337 397 ntBASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 NIPA2P2-201ENST00000496376 1083 ntBASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 RNU6-1073P-201ENST00000517182 106 ntBASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 AP001207.1-201ENST00000524051 481 ntBASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 AC109635.4-202ENST00000531666 412 ntBASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 LRRC34P1-201ENST00000542742 915 ntBASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 NIFKP8-201ENST00000560500 874 ntBASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 AC009101.1-201ENST00000568135 242 ntBASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 AC009948.4-201ENST00000604692 675 ntBASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 AC013244.3-201ENST00000605614 388 ntBASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 uc_338.1-201ENST00000612113 180 ntBASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 AL356321.1-201ENST00000621360 228 ntBASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 BX649567.1-201ENST00000642071 1134 ntBASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 AL161912.2-201ENST00000565707 3007 ntBASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
TRIM49BA6NDI0 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 SGO1P1-201ENST00000603525 1447 ntBASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 RNU6-906P-201ENST00000384700 70 ntBASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 MIR649-201ENST00000384843 97 ntBASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 MIR16-1-201ENST00000385271 89 ntBASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 MTCO3P31-201ENST00000405526 789 ntBASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 AC063979.1-201ENST00000415539 377 ntBASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 AC012065.2-201ENST00000421295 375 ntBASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 AC017083.1-201ENST00000428093 483 ntBASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 YME1L1P1-201ENST00000429435 297 ntBASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 GTF2IP3-201ENST00000433887 494 ntBASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 AC115115.1-201ENST00000449927 248 ntBASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 CDC42P1-201ENST00000456658 548 ntBASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 AC134050.1-201ENST00000495088 933 ntBASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 AC021678.1-201ENST00000505195 936 ntBASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 AC119751.1-201ENST00000513357 765 ntBASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 APOOP4-201ENST00000513530 597 ntBASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 EEF1A1P37-201ENST00000522748 715 ntBASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 CCNG2P1-201ENST00000549521 1000 ntBASIC3.61□□□□□ -1.83
TRIM49BA6NDI0 LSM6P2-201ENST00000552208 177 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms