Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 AP002001.2-201ENST00000529025 1469 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 NXPH1-205ENST00000602349 1953 ntBASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CTDP1Q9Y5B0 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 AC008033.1-201ENST00000216407 1162 ntBASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 RNA5SP479-201ENST00000364858 117 ntBASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 RNA5SP366-201ENST00000365454 123 ntBASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 RNU6-1151P-201ENST00000384684 107 ntBASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 MIR3065-201ENST00000390137 79 ntBASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 AL592291.1-201ENST00000403830 352 ntBASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 RNU2-6P-201ENST00000411404 190 ntBASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 MTND3P23-201ENST00000431980 347 ntBASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 AL132765.1-201ENST00000434165 553 ntBASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 MTND4LP10-201ENST00000435146 291 ntBASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 SNRPEP8-201ENST00000442866 260 ntBASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 UBE2V1P7-201ENST00000446395 340 ntBASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 DHFRP3-201ENST00000455595 559 ntBASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 AC091564.1-201ENST00000464563 479 ntBASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 AC091133.4-201ENST00000511142 308 ntBASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 TVP23BP1-201ENST00000557500 617 ntBASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 AC015912.2-201ENST00000571053 181 ntBASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 AC103710.1-201ENST00000610003 901 ntBASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 AC108479.2-201ENST00000617314 601 ntBASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 AC068831.8-201ENST00000620171 435 ntBASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 AP003400.5-201ENST00000624827 617 ntBASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 AC140479.6-201ENST00000633535 357 ntBASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
CTDP1Q9Y5B0 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 LINC00561-201ENST00000565815 2738 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 AL512646.1-201ENST00000269395 1077 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 MIR383-201ENST00000362257 73 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 Y_RNA.9-201ENST00000362354 101 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 Y_RNA.97-201ENST00000363094 102 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 MIR506-201ENST00000384998 124 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 U8.14-201ENST00000390843 143 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 AL121834.1-202ENST00000404494 277 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 RN7SKP263-201ENST00000411194 309 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 AC073264.1-201ENST00000411508 416 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 ZYG11AP1-201ENST00000430329 837 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 HMGB1P31-201ENST00000437242 427 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 AC114755.5-201ENST00000447760 831 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 MTND5P20-201ENST00000448677 143 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 NFU1P2-201ENST00000448700 469 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 NUTF2P7-201ENST00000453086 375 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 AC013828.1-201ENST00000481845 158 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 AC021678.1-201ENST00000505195 936 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 ARL2BPP6-201ENST00000512757 439 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 AC010342.1-201ENST00000514047 877 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 Y_RNA.702-201ENST00000516843 96 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 AC134698.5-201ENST00000519444 336 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 AF279873.1-201ENST00000523393 313 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 CYCSP29-201ENST00000533731 318 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 RN7SL176P-201ENST00000580352 264 ntBASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CTDP1Q9Y5B0 AC006504.3-201ENST00000586818 523 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms