Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.92□□□□□ -1.94
RHBDD3Q9Y3P4 AC006249.1-201ENST00000621223 471 ntBASIC2.92□□□□□ -1.94
RHBDD3Q9Y3P4 AC243312.2-201ENST00000623340 601 ntBASIC2.92□□□□□ -1.94
RHBDD3Q9Y3P4 AC040168.1-201ENST00000623594 991 ntBASIC2.92□□□□□ -1.94
RHBDD3Q9Y3P4 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
RHBDD3Q9Y3P4 AC091564.4-201ENST00000533934 2194 ntBASIC2.92□□□□□ -1.94
RHBDD3Q9Y3P4 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.92□□□□□ -1.94
RHBDD3Q9Y3P4 AC233263.6-201ENST00000631132 1963 ntBASIC2.92□□□□□ -1.94
RHBDD3Q9Y3P4 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.92□□□□□ -1.94
RHBDD3Q9Y3P4 AC017071.1-201ENST00000564407 2204 ntBASIC2.92□□□□□ -1.94
RHBDD3Q9Y3P4 API5P2-201ENST00000397055 1498 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 MTND4P21-201ENST00000453886 1357 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 AC004972.1-201ENST00000623934 2209 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 RNU4-35P-201ENST00000362588 141 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 RNA5SP119-201ENST00000362715 117 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 RNA5SP197-201ENST00000363357 119 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 RNU6-799P-201ENST00000363567 107 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 RNU6-173P-201ENST00000364215 104 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 SNORD82-201ENST00000365530 70 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 OR6K3-202ENST00000368146 996 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 RNU6-1027P-201ENST00000383998 107 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 MIR218-2-201ENST00000385006 110 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 AL024474.1-201ENST00000404655 591 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 RN7SKP111-201ENST00000410349 271 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 SSXP9-201ENST00000417503 292 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 ATG3P1-201ENST00000419507 911 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 AL645638.1-201ENST00000440519 361 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 RPL21P133-201ENST00000443666 476 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 HSFY3P-201ENST00000444242 1191 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 AC125238.1-201ENST00000448842 249 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 TPRKBP1-201ENST00000456243 481 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 NAP1L1P3-201ENST00000462291 880 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 HMGN1P15-201ENST00000513870 295 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 IGKV2-26-201ENST00000518305 343 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 AC026403.1-201ENST00000518938 295 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 OR5B10P-201ENST00000532869 642 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 AC090666.1-201ENST00000578241 445 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 FAM60BP-201ENST00000578364 658 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 MIR3922-201ENST00000585192 84 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 AL020997.3-201ENST00000602843 359 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 AC106730.3-201ENST00000624568 641 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 AC127502.3-201ENST00000636170 1206 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 AC244258.1-201ENST00000637553 1071 ntBASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
RHBDD3Q9Y3P4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.9□□□□□ -1.94
RHBDD3Q9Y3P4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
RHBDD3Q9Y3P4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.9□□□□□ -1.94
RHBDD3Q9Y3P4 RNU6-650P-201ENST00000365658 111 ntBASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 MIR134-201ENST00000385258 73 ntBASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 MTCO2P31-201ENST00000402702 684 ntBASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 AL356967.1-201ENST00000406305 431 ntBASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 U3.42-201ENST00000408746 214 ntBASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 RPS29P4-201ENST00000414733 161 ntBASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 AC092641.1-201ENST00000440229 772 ntBASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 CDC42P1-201ENST00000456658 548 ntBASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 RPS27P29-201ENST00000463110 252 ntBASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 AC021146.5-201ENST00000503544 545 ntBASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 AC093767.1-201ENST00000504523 156 ntBASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 AC112198.1-201ENST00000505369 1220 ntBASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 TXNP6-201ENST00000510190 310 ntBASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 SNORA64.4-201ENST00000516632 81 ntBASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 RN7SKP282-201ENST00000516824 299 ntBASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 OR10V3P-201ENST00000525712 725 ntBASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 AP000916.1-201ENST00000533869 835 ntBASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 AC011611.5-201ENST00000552477 578 ntBASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
RHBDD3Q9Y3P4 AC034105.4-201ENST00000568304 277 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms