Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 SNRPEP7-201ENST00000438350 220 ntBASIC3.25□□□□□ -1.89
FOXA2Q9Y261 THAP5P1-201ENST00000439089 262 ntBASIC3.25□□□□□ -1.89
FOXA2Q9Y261 FGF7P5-201ENST00000441829 291 ntBASIC3.25□□□□□ -1.89
FOXA2Q9Y261 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.25□□□□□ -1.89
FOXA2Q9Y261 RN7SL385P-201ENST00000468873 276 ntBASIC3.25□□□□□ -1.89
FOXA2Q9Y261 RPL31P50-201ENST00000471002 296 ntBASIC3.25□□□□□ -1.89
FOXA2Q9Y261 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.25□□□□□ -1.89
FOXA2Q9Y261 RPL7P47-201ENST00000497299 556 ntBASIC3.25□□□□□ -1.89
FOXA2Q9Y261 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.25□□□□□ -1.89
FOXA2Q9Y261 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.25□□□□□ -1.89
FOXA2Q9Y261 AC093281.2-201ENST00000510153 597 ntBASIC3.25□□□□□ -1.89
FOXA2Q9Y261 AC017037.2-201ENST00000513850 890 ntBASIC3.25□□□□□ -1.89
FOXA2Q9Y261 AC010342.1-201ENST00000514047 877 ntBASIC3.25□□□□□ -1.89
FOXA2Q9Y261 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.25□□□□□ -1.89
FOXA2Q9Y261 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.25□□□□□ -1.89
FOXA2Q9Y261 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.25□□□□□ -1.89
FOXA2Q9Y261 CYCSP29-201ENST00000533731 318 ntBASIC3.25□□□□□ -1.89
FOXA2Q9Y261 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
FOXA2Q9Y261 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.25□□□□□ -1.89
FOXA2Q9Y261 MTND4P33-201ENST00000556706 766 ntBASIC3.25□□□□□ -1.89
FOXA2Q9Y261 PARP1P2-201ENST00000556806 195 ntBASIC3.25□□□□□ -1.89
FOXA2Q9Y261 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.25□□□□□ -1.89
FOXA2Q9Y261 AP005205.1-201ENST00000563503 508 ntBASIC3.25□□□□□ -1.89
FOXA2Q9Y261 AC025627.2-201ENST00000576220 160 ntBASIC3.25□□□□□ -1.89
FOXA2Q9Y261 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.25□□□□□ -1.89
FOXA2Q9Y261 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.25□□□□□ -1.89
FOXA2Q9Y261 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.25□□□□□ -1.89
FOXA2Q9Y261 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.25□□□□□ -1.89
FOXA2Q9Y261 AC011451.2-201ENST00000604303 598 ntBASIC3.25□□□□□ -1.89
FOXA2Q9Y261 AC092354.2-201ENST00000607786 514 ntBASIC3.25□□□□□ -1.89
FOXA2Q9Y261 AP002826.1-201ENST00000608835 315 ntBASIC3.25□□□□□ -1.89
FOXA2Q9Y261 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.25□□□□□ -1.89
FOXA2Q9Y261 MIR486-1-201ENST00000612171 68 ntBASIC3.25□□□□□ -1.89
FOXA2Q9Y261 AC010608.2-201ENST00000624830 470 ntBASIC3.25□□□□□ -1.89
FOXA2Q9Y261 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
FOXA2Q9Y261 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
FOXA2Q9Y261 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
FOXA2Q9Y261 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
FOXA2Q9Y261 UBE3AP2-201ENST00000429033 2259 ntBASIC3.24□□□□□ -1.89
FOXA2Q9Y261 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 RPL7P26-201ENST00000333817 754 ntBASIC3.24□□□□□ -1.89
FOXA2Q9Y261 AL161781.1-201ENST00000354277 403 ntBASIC3.24□□□□□ -1.89
FOXA2Q9Y261 Y_RNA.234-201ENST00000364409 97 ntBASIC3.24□□□□□ -1.89
FOXA2Q9Y261 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 AL159169.1-201ENST00000421119 127 ntBASIC3.24□□□□□ -1.89
FOXA2Q9Y261 AC024082.2-201ENST00000434771 238 ntBASIC3.24□□□□□ -1.89
FOXA2Q9Y261 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 RPL17P49-201ENST00000443728 411 ntBASIC3.24□□□□□ -1.89
FOXA2Q9Y261 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 AC108860.1-201ENST00000484521 383 ntBASIC3.24□□□□□ -1.89
FOXA2Q9Y261 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 AC021146.8-201ENST00000507455 733 ntBASIC3.24□□□□□ -1.89
FOXA2Q9Y261 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 RNU6-415P-201ENST00000516252 97 ntBASIC3.24□□□□□ -1.89
FOXA2Q9Y261 COX6CP8-201ENST00000522620 226 ntBASIC3.24□□□□□ -1.89
FOXA2Q9Y261 ERHP1-201ENST00000523006 310 ntBASIC3.24□□□□□ -1.89
FOXA2Q9Y261 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 AL109653.1-201ENST00000603091 248 ntBASIC3.24□□□□□ -1.89
FOXA2Q9Y261 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.24□□□□□ -1.89
FOXA2Q9Y261 HMGB1P50-201ENST00000605814 607 ntBASIC3.24□□□□□ -1.89
FOXA2Q9Y261 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 AC083809.1-201ENST00000615051 472 ntBASIC3.24□□□□□ -1.89
FOXA2Q9Y261 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 AL591424.2-201ENST00000617023 128 ntBASIC3.24□□□□□ -1.89
FOXA2Q9Y261 MIR7151-201ENST00000617477 60 ntBASIC3.24□□□□□ -1.89
FOXA2Q9Y261 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
FOXA2Q9Y261 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.23□□□□□ -1.89
FOXA2Q9Y261 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.23□□□□□ -1.89
FOXA2Q9Y261 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
FOXA2Q9Y261 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
FOXA2Q9Y261 ZNF807-201ENST00000328088 1707 ntBASIC3.23□□□□□ -1.89
FOXA2Q9Y261 RNA5SP322-201ENST00000363617 119 ntBASIC3.23□□□□□ -1.89
FOXA2Q9Y261 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
FOXA2Q9Y261 ANAPC10P1-201ENST00000395991 556 ntBASIC3.23□□□□□ -1.89
FOXA2Q9Y261 AL022722.2-201ENST00000402519 180 ntBASIC3.23□□□□□ -1.89
FOXA2Q9Y261 RN7SKP33-201ENST00000410942 340 ntBASIC3.23□□□□□ -1.89
FOXA2Q9Y261 RN7SKP53-201ENST00000411337 315 ntBASIC3.23□□□□□ -1.89
FOXA2Q9Y261 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.23□□□□□ -1.89
FOXA2Q9Y261 AC006960.1-201ENST00000419980 153 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms