Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AL513175.2-201ENST00000422071 443 ntBASIC3.61□□□□□ -1.83
SHANK2Q9UPX8 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.61□□□□□ -1.83
SHANK2Q9UPX8 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.61□□□□□ -1.83
SHANK2Q9UPX8 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.61□□□□□ -1.83
SHANK2Q9UPX8 RN7SL283P-201ENST00000489055 303 ntBASIC3.61□□□□□ -1.83
SHANK2Q9UPX8 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.61□□□□□ -1.83
SHANK2Q9UPX8 MTND4P2-201ENST00000507767 1203 ntBASIC3.61□□□□□ -1.83
SHANK2Q9UPX8 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.61□□□□□ -1.83
SHANK2Q9UPX8 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.61□□□□□ -1.83
SHANK2Q9UPX8 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.61□□□□□ -1.83
SHANK2Q9UPX8 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.61□□□□□ -1.83
SHANK2Q9UPX8 AC067747.1-201ENST00000608026 250 ntBASIC3.61□□□□□ -1.83
SHANK2Q9UPX8 AC107294.3-201ENST00000609211 526 ntBASIC3.61□□□□□ -1.83
SHANK2Q9UPX8 BX664608.1-201ENST00000610519 487 ntBASIC3.61□□□□□ -1.83
SHANK2Q9UPX8 AC104237.2-201ENST00000612456 443 ntBASIC3.61□□□□□ -1.83
SHANK2Q9UPX8 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
SHANK2Q9UPX8 AC069528.2-201ENST00000624849 1991 ntBASIC3.61□□□□□ -1.83
SHANK2Q9UPX8 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
SHANK2Q9UPX8 Y_RNA.355-201ENST00000365462 98 ntBASIC3.6□□□□□ -1.83
SHANK2Q9UPX8 RNU6-328P-201ENST00000390887 106 ntBASIC3.6□□□□□ -1.83
SHANK2Q9UPX8 RN7SKP140-201ENST00000411196 284 ntBASIC3.6□□□□□ -1.83
SHANK2Q9UPX8 MORF4L1P6-201ENST00000418771 268 ntBASIC3.6□□□□□ -1.83
SHANK2Q9UPX8 ARF4P2-201ENST00000430209 526 ntBASIC3.6□□□□□ -1.83
SHANK2Q9UPX8 TRBV1-201ENST00000476502 284 ntBASIC3.6□□□□□ -1.83
SHANK2Q9UPX8 LINC00888-204ENST00000487386 421 ntBASIC3.6□□□□□ -1.83
SHANK2Q9UPX8 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.6□□□□□ -1.83
SHANK2Q9UPX8 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.6□□□□□ -1.83
SHANK2Q9UPX8 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
SHANK2Q9UPX8 AC074029.1-201ENST00000552531 1044 ntBASIC3.6□□□□□ -1.83
SHANK2Q9UPX8 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.6□□□□□ -1.83
SHANK2Q9UPX8 AC009570.1-201ENST00000609599 745 ntBASIC3.6□□□□□ -1.83
SHANK2Q9UPX8 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SHANK2Q9UPX8 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.6□□□□□ -1.83
SHANK2Q9UPX8 Y_RNA.595-201ENST00000410403 105 ntBASIC3.6□□□□□ -1.83
SHANK2Q9UPX8 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.6□□□□□ -1.83
SHANK2Q9UPX8 AC104389.3-201ENST00000445629 235 ntBASIC3.6□□□□□ -1.83
SHANK2Q9UPX8 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.6□□□□□ -1.83
SHANK2Q9UPX8 AC068587.2-201ENST00000478386 781 ntBASIC3.6□□□□□ -1.83
SHANK2Q9UPX8 AL049830.2-201ENST00000480072 201 ntBASIC3.6□□□□□ -1.83
SHANK2Q9UPX8 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.6□□□□□ -1.83
SHANK2Q9UPX8 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.6□□□□□ -1.83
SHANK2Q9UPX8 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.6□□□□□ -1.83
SHANK2Q9UPX8 AL136981.2-201ENST00000617319 734 ntBASIC3.6□□□□□ -1.83
SHANK2Q9UPX8 AC067852.7-201ENST00000623270 535 ntBASIC3.6□□□□□ -1.83
SHANK2Q9UPX8 MAPK10-322ENST00000641485 4530 ntBASIC3.59□□□□□ -1.83
SHANK2Q9UPX8 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SHANK2Q9UPX8 RPL23AP36-201ENST00000413895 458 ntBASIC3.59□□□□□ -1.84
SHANK2Q9UPX8 AL158825.1-201ENST00000414735 521 ntBASIC3.59□□□□□ -1.84
SHANK2Q9UPX8 MTCO2P17-201ENST00000424336 677 ntBASIC3.59□□□□□ -1.84
SHANK2Q9UPX8 AC009414.1-201ENST00000427200 443 ntBASIC3.59□□□□□ -1.84
SHANK2Q9UPX8 CACYBPP1-201ENST00000438592 684 ntBASIC3.59□□□□□ -1.84
SHANK2Q9UPX8 AC091179.1-201ENST00000461606 579 ntBASIC3.59□□□□□ -1.84
SHANK2Q9UPX8 RPL9P6-201ENST00000492764 598 ntBASIC3.59□□□□□ -1.84
SHANK2Q9UPX8 AP001086.1-201ENST00000494882 321 ntBASIC3.59□□□□□ -1.84
SHANK2Q9UPX8 AC116337.1-201ENST00000509680 687 ntBASIC3.59□□□□□ -1.84
SHANK2Q9UPX8 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.59□□□□□ -1.84
SHANK2Q9UPX8 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.59□□□□□ -1.84
SHANK2Q9UPX8 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SHANK2Q9UPX8 MIR5007-201ENST00000583098 95 ntBASIC3.59□□□□□ -1.84
SHANK2Q9UPX8 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SHANK2Q9UPX8 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.58□□□□□ -1.84
SHANK2Q9UPX8 CDC27P2-201ENST00000425026 1922 ntBASIC3.58□□□□□ -1.84
SHANK2Q9UPX8 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
SHANK2Q9UPX8 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.58□□□□□ -1.84
SHANK2Q9UPX8 Y_RNA.140-201ENST00000363474 103 ntBASIC3.58□□□□□ -1.84
SHANK2Q9UPX8 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SHANK2Q9UPX8 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.58□□□□□ -1.84
SHANK2Q9UPX8 AC009969.1-201ENST00000438726 172 ntBASIC3.58□□□□□ -1.84
SHANK2Q9UPX8 RPL9P33-201ENST00000484311 566 ntBASIC3.58□□□□□ -1.84
SHANK2Q9UPX8 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.58□□□□□ -1.84
SHANK2Q9UPX8 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHANK2Q9UPX8 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.58□□□□□ -1.84
SHANK2Q9UPX8 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.58□□□□□ -1.84
SHANK2Q9UPX8 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHANK2Q9UPX8 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.58□□□□□ -1.84
SHANK2Q9UPX8 AP003117.2-201ENST00000606010 545 ntBASIC3.58□□□□□ -1.84
SHANK2Q9UPX8 RNU6-84P-201ENST00000607737 102 ntBASIC3.58□□□□□ -1.84
SHANK2Q9UPX8 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.58□□□□□ -1.84
SHANK2Q9UPX8 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SHANK2Q9UPX8 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SHANK2Q9UPX8 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SHANK2Q9UPX8 MTND5P6-201ENST00000422338 1798 ntBASIC3.57□□□□□ -1.84
SHANK2Q9UPX8 SNORD6-201ENST00000365444 73 ntBASIC3.57□□□□□ -1.84
SHANK2Q9UPX8 SDCBPP3-201ENST00000419629 891 ntBASIC3.57□□□□□ -1.84
SHANK2Q9UPX8 AL592045.1-201ENST00000429867 352 ntBASIC3.57□□□□□ -1.84
SHANK2Q9UPX8 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.57□□□□□ -1.84
SHANK2Q9UPX8 AC108860.1-201ENST00000484521 383 ntBASIC3.57□□□□□ -1.84
SHANK2Q9UPX8 AP000926.3-201ENST00000497201 299 ntBASIC3.57□□□□□ -1.84
SHANK2Q9UPX8 AP001317.1-201ENST00000531194 960 ntBASIC3.57□□□□□ -1.84
SHANK2Q9UPX8 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.57□□□□□ -1.84
SHANK2Q9UPX8 AC025281.1-201ENST00000567026 265 ntBASIC3.57□□□□□ -1.84
SHANK2Q9UPX8 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.57□□□□□ -1.84
SHANK2Q9UPX8 AC061975.8-201ENST00000587058 721 ntBASIC3.57□□□□□ -1.84
SHANK2Q9UPX8 AC110994.2-201ENST00000635481 492 ntBASIC3.57□□□□□ -1.84
SHANK2Q9UPX8 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SHANK2Q9UPX8 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SHANK2Q9UPX8 AC009501.3-201ENST00000605001 1352 ntBASIC3.57□□□□□ -1.84
SHANK2Q9UPX8 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SHANK2Q9UPX8 AC092326.2-201ENST00000624772 1561 ntBASIC3.56□□□□□ -1.84
SHANK2Q9UPX8 SNORA62.2-201ENST00000364672 152 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms