Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.29□□□□□ -1.72
VPS4AQ9UN37 IGLVIV-53-201ENST00000520107 367 ntBASIC4.29□□□□□ -1.72
VPS4AQ9UN37 MRPL49P2-201ENST00000521066 465 ntBASIC4.29□□□□□ -1.72
VPS4AQ9UN37 OR5AP1P-201ENST00000529730 940 ntBASIC4.29□□□□□ -1.72
VPS4AQ9UN37 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS4AQ9UN37 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS4AQ9UN37 AL139395.1-201ENST00000603662 160 ntBASIC4.29□□□□□ -1.72
VPS4AQ9UN37 AP002360.3-201ENST00000607673 710 ntBASIC4.29□□□□□ -1.72
VPS4AQ9UN37 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.29□□□□□ -1.72
VPS4AQ9UN37 AC018755.4-201ENST00000619715 454 ntBASIC4.29□□□□□ -1.72
VPS4AQ9UN37 AC000123.2-201ENST00000623124 461 ntBASIC4.29□□□□□ -1.72
VPS4AQ9UN37 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS4AQ9UN37 CYP3A51P-201ENST00000633513 256 ntBASIC4.29□□□□□ -1.72
VPS4AQ9UN37 FAM157B-203ENST00000639350 358 ntBASIC4.29□□□□□ -1.72
VPS4AQ9UN37 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
VPS4AQ9UN37 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
VPS4AQ9UN37 RAD17P1-201ENST00000418130 2042 ntBASIC4.29□□□□□ -1.72
VPS4AQ9UN37 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS4AQ9UN37 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VPS4AQ9UN37 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.29□□□□□ -1.72
VPS4AQ9UN37 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 Y_RNA.41-201ENST00000362646 102 ntBASIC4.28□□□□□ -1.72
VPS4AQ9UN37 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 RNU6-730P-201ENST00000383954 104 ntBASIC4.28□□□□□ -1.72
VPS4AQ9UN37 SSXP10-201ENST00000402595 565 ntBASIC4.28□□□□□ -1.72
VPS4AQ9UN37 AC006946.1-201ENST00000429106 328 ntBASIC4.28□□□□□ -1.72
VPS4AQ9UN37 C8orf59P1-201ENST00000429930 303 ntBASIC4.28□□□□□ -1.72
VPS4AQ9UN37 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 MTND1P27-201ENST00000451117 902 ntBASIC4.28□□□□□ -1.72
VPS4AQ9UN37 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 PRELID3BP7-201ENST00000503606 469 ntBASIC4.28□□□□□ -1.72
VPS4AQ9UN37 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 KCTD9P2-201ENST00000512203 1013 ntBASIC4.28□□□□□ -1.72
VPS4AQ9UN37 AC024589.1-201ENST00000512207 263 ntBASIC4.28□□□□□ -1.72
VPS4AQ9UN37 RN7SKP82-201ENST00000516786 223 ntBASIC4.28□□□□□ -1.72
VPS4AQ9UN37 IGLVIV-65-201ENST00000517313 360 ntBASIC4.28□□□□□ -1.72
VPS4AQ9UN37 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 AC022790.1-201ENST00000522872 204 ntBASIC4.28□□□□□ -1.72
VPS4AQ9UN37 AP002748.2-201ENST00000528671 348 ntBASIC4.28□□□□□ -1.72
VPS4AQ9UN37 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 MIR4528-201ENST00000577763 90 ntBASIC4.28□□□□□ -1.72
VPS4AQ9UN37 MIR5697-201ENST00000578045 78 ntBASIC4.28□□□□□ -1.72
VPS4AQ9UN37 MTND1P15-201ENST00000579262 949 ntBASIC4.28□□□□□ -1.72
VPS4AQ9UN37 MIR4429-201ENST00000580105 73 ntBASIC4.28□□□□□ -1.72
VPS4AQ9UN37 MIR3138-201ENST00000585238 82 ntBASIC4.28□□□□□ -1.72
VPS4AQ9UN37 BPIFA4P-203ENST00000603168 689 ntBASIC4.28□□□□□ -1.72
VPS4AQ9UN37 PRELID3BP8-201ENST00000604148 295 ntBASIC4.28□□□□□ -1.72
VPS4AQ9UN37 AC090948.1-201ENST00000607464 549 ntBASIC4.28□□□□□ -1.72
VPS4AQ9UN37 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 AC103710.4-201ENST00000609301 899 ntBASIC4.28□□□□□ -1.72
VPS4AQ9UN37 AC114781.5-201ENST00000615297 108 ntBASIC4.28□□□□□ -1.72
VPS4AQ9UN37 AC093591.3-201ENST00000634516 308 ntBASIC4.28□□□□□ -1.72
VPS4AQ9UN37 CRYM-AS1-204ENST00000637983 556 ntBASIC4.28□□□□□ -1.72
VPS4AQ9UN37 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 AC139769.1-204ENST00000472297 1931 ntBASIC4.28□□□□□ -1.72
VPS4AQ9UN37 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 AC125257.1-201ENST00000560400 2930 ntBASIC4.28□□□□□ -1.72
VPS4AQ9UN37 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
VPS4AQ9UN37 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS4AQ9UN37 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VPS4AQ9UN37 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS4AQ9UN37 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS4AQ9UN37 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
VPS4AQ9UN37 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS4AQ9UN37 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.27□□□□□ -1.73
VPS4AQ9UN37 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
VPS4AQ9UN37 RNU6-297P-201ENST00000384636 107 ntBASIC4.27□□□□□ -1.73
VPS4AQ9UN37 U8.14-201ENST00000390843 143 ntBASIC4.27□□□□□ -1.73
VPS4AQ9UN37 ENSAP1-201ENST00000392855 326 ntBASIC4.27□□□□□ -1.73
VPS4AQ9UN37 SDHCP2-201ENST00000398565 501 ntBASIC4.27□□□□□ -1.73
VPS4AQ9UN37 BTBD10P2-201ENST00000404779 676 ntBASIC4.27□□□□□ -1.73
VPS4AQ9UN37 RNU6-628P-201ENST00000410675 107 ntBASIC4.27□□□□□ -1.73
VPS4AQ9UN37 HMGN1P14-201ENST00000412459 517 ntBASIC4.27□□□□□ -1.73
VPS4AQ9UN37 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS4AQ9UN37 AC011933.1-201ENST00000413334 321 ntBASIC4.27□□□□□ -1.73
VPS4AQ9UN37 OFD1P18Y-201ENST00000420889 959 ntBASIC4.27□□□□□ -1.73
VPS4AQ9UN37 RAD23BP1-201ENST00000421404 1227 ntBASIC4.27□□□□□ -1.73
VPS4AQ9UN37 AL513174.1-201ENST00000423182 629 ntBASIC4.27□□□□□ -1.73
VPS4AQ9UN37 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.27□□□□□ -1.73
VPS4AQ9UN37 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.27□□□□□ -1.73
VPS4AQ9UN37 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.27□□□□□ -1.73
VPS4AQ9UN37 BX322784.1-201ENST00000455793 1077 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms