Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
ZNRF3Q9ULT6 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ZNRF3Q9ULT6 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
ZNRF3Q9ULT6 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
ZNRF3Q9ULT6 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
ZNRF3Q9ULT6 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.6□□□□□ -1.51
ZNRF3Q9ULT6 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
ZNRF3Q9ULT6 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 RNY1P12-201ENST00000364251 105 ntBASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 RNA5SP366-201ENST00000365454 123 ntBASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 SNORA20.2-201ENST00000383922 131 ntBASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 AL356776.1-201ENST00000406574 447 ntBASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 AL035410.1-201ENST00000427409 427 ntBASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 TPT1P14-201ENST00000448018 505 ntBASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 RPL7P52-201ENST00000449200 742 ntBASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 AF235103.2-201ENST00000525753 346 ntBASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 AP000907.2-201ENST00000530827 353 ntBASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 AC124068.1-201ENST00000563131 678 ntBASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 AC009101.1-201ENST00000568135 242 ntBASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 RN7SL176P-201ENST00000580352 264 ntBASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 AL445437.1-201ENST00000623157 3087 ntBASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.59□□□□□ -1.51
ZNRF3Q9ULT6 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.59□□□□□ -1.52
ZNRF3Q9ULT6 AC027228.2-201ENST00000567141 2154 ntBASIC5.59□□□□□ -1.52
ZNRF3Q9ULT6 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
ZNRF3Q9ULT6 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 RNU6-249P-201ENST00000363016 102 ntBASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 RNU1-130P-201ENST00000363930 160 ntBASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 RN7SKP224-201ENST00000364140 325 ntBASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 RNU6-1207P-201ENST00000384343 107 ntBASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 RNU1-13P-201ENST00000384499 162 ntBASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 RNA5SP317-201ENST00000410176 116 ntBASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 RN7SKP16-201ENST00000410180 299 ntBASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 RNA5SP311-201ENST00000411290 116 ntBASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 RPL23AP93-201ENST00000440847 484 ntBASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 Z95327.1-201ENST00000446082 482 ntBASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 PHBP16-201ENST00000446318 950 ntBASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 AC073073.1-201ENST00000493920 463 ntBASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 AC023424.1-201ENST00000496058 459 ntBASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 AC114786.4-201ENST00000508771 728 ntBASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 RNA5SP315-201ENST00000516340 116 ntBASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 RNA5SP312-201ENST00000517068 116 ntBASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 AC104383.1-201ENST00000530297 370 ntBASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 AC068993.1-201ENST00000546724 589 ntBASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 FKBP1BP1-201ENST00000553366 325 ntBASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 AL356432.3-201ENST00000568952 465 ntBASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 AC112230.1-201ENST00000604342 547 ntBASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 FER-210ENST00000628534 558 ntTSL 5 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 MIR492-201ENST00000638676 116 ntBASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 AC092376.2-201ENST00000622621 4116 ntBASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 LINC00622-201ENST00000562811 1570 ntBASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms