Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 RNU1-18P-201ENST00000363062 164 ntBASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 RNU6-7-201ENST00000364784 107 ntBASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 RNU6-283P-201ENST00000364788 107 ntBASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 RNU6-8-201ENST00000365467 107 ntBASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 RNU6-921P-201ENST00000384361 107 ntBASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 MTCO2P8-201ENST00000412213 658 ntBASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 AL139281.1-201ENST00000422120 335 ntBASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 ATP5HP2-201ENST00000433885 485 ntBASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 GTF2IP7-202ENST00000436677 309 ntBASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 RPL23AP44-201ENST00000482216 473 ntBASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 AC027309.2-201ENST00000520566 192 ntBASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 MTCO2P2-201ENST00000591258 225 ntBASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 AL359757.2-201ENST00000624309 274 ntBASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 AL732372.2-225ENST00000642124 456 ntBASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 SEPT7P7-201ENST00000420492 1301 ntBASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SHROOM4Q9ULL8 snoZ40.1-201ENST00000364540 72 ntBASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AL136310.1-201ENST00000404926 654 ntBASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AL136133.1-201ENST00000413694 376 ntBASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 MTCO3P1-205ENST00000422088 832 ntBASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AC114973.1-201ENST00000429057 632 ntBASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AC004854.1-201ENST00000440356 349 ntBASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 RPL7P38-201ENST00000488396 739 ntBASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AC010486.1-201ENST00000511793 424 ntBASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AP001189.2-201ENST00000527320 189 ntBASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 OR4G1P-201ENST00000588632 938 ntBASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AL157392.4-201ENST00000609756 345 ntBASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AL356489.2-201ENST00000566968 3528 ntBASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AC007435.1-201ENST00000421086 415 ntBASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AL645638.1-201ENST00000440519 361 ntBASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AC010307.1-201ENST00000467206 836 ntBASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AC113420.1-201ENST00000507903 571 ntBASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AP000790.1-201ENST00000528891 737 ntBASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 ZNF705CP-201ENST00000530515 889 ntBASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AL121603.1-201ENST00000553815 142 ntBASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AL133457.1-201ENST00000564251 987 ntBASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 MTND3P13-201ENST00000574391 343 ntBASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AC245884.10-201ENST00000597355 337 ntBASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AC092954.1-201ENST00000609121 445 ntBASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AC024257.5-201ENST00000612739 531 ntBASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AC009464.1-201ENST00000615731 469 ntBASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 AC121761.2-201ENST00000617300 689 ntBASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 DLD-214ENST00000639772 421 ntTSL 5 BASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 LINC02211-204ENST00000642024 1070 ntBASIC6.47□□□□□ -1.37
SHROOM4Q9ULL8 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC6.46□□□□□ -1.37
SHROOM4Q9ULL8 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC6.46□□□□□ -1.37
SHROOM4Q9ULL8 AP005901.5-201ENST00000545779 1796 ntBASIC6.46□□□□□ -1.37
SHROOM4Q9ULL8 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
SHROOM4Q9ULL8 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SHROOM4Q9ULL8 MTATP6P20-201ENST00000414147 562 ntBASIC6.46□□□□□ -1.38
SHROOM4Q9ULL8 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC6.46□□□□□ -1.38
SHROOM4Q9ULL8 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SHROOM4Q9ULL8 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC6.46□□□□□ -1.38
SHROOM4Q9ULL8 AL590399.6-201ENST00000446396 307 ntBASIC6.46□□□□□ -1.38
SHROOM4Q9ULL8 AL589880.1-201ENST00000448271 287 ntBASIC6.46□□□□□ -1.38
SHROOM4Q9ULL8 AC004924.1-201ENST00000480160 781 ntBASIC6.46□□□□□ -1.38
SHROOM4Q9ULL8 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC6.46□□□□□ -1.38
SHROOM4Q9ULL8 OR2A20P-203ENST00000498397 1268 ntBASIC6.46□□□□□ -1.38
SHROOM4Q9ULL8 TRAV31-201ENST00000502780 342 ntBASIC6.46□□□□□ -1.38
SHROOM4Q9ULL8 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC6.46□□□□□ -1.38
SHROOM4Q9ULL8 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC6.46□□□□□ -1.38
SHROOM4Q9ULL8 AC083899.3-201ENST00000603413 594 ntBASIC6.46□□□□□ -1.38
SHROOM4Q9ULL8 AL035411.2-201ENST00000604022 421 ntBASIC6.46□□□□□ -1.38
SHROOM4Q9ULL8 AC005332.6-201ENST00000613178 446 ntBASIC6.46□□□□□ -1.38
SHROOM4Q9ULL8 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
SHROOM4Q9ULL8 PABPC1P7-201ENST00000413177 1513 ntBASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 SNORA72.3-201ENST00000365074 132 ntBASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 SUGT1P1-201ENST00000379514 476 ntBASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 SNORD65.1-201ENST00000390889 71 ntBASIC6.45□□□□□ -1.38
SHROOM4Q9ULL8 HMGN2P8-201ENST00000391458 268 ntBASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms