Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 RN7SKP125-201ENST00000410481 302 ntBASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 MTCO3P12-201ENST00000416718 547 ntBASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 ATP5JP1-201ENST00000431631 322 ntBASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 AL627308.1-201ENST00000435693 821 ntBASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 RPL35AP21-201ENST00000437667 333 ntBASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 AC140076.1-201ENST00000449897 361 ntBASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 RNU7-63P-201ENST00000459054 62 ntBASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 RN7SL189P-201ENST00000468631 289 ntBASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 AC021382.1-201ENST00000483523 359 ntBASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 RPL32P9-201ENST00000487963 407 ntBASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 AC022133.1-201ENST00000490961 571 ntBASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 HMGN1P13-201ENST00000505795 138 ntBASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 GAPDHP56-201ENST00000506031 988 ntBASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 SCARNA24.1-201ENST00000516465 137 ntBASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 SNORD60.2-201ENST00000516883 86 ntBASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 RNU6-410P-201ENST00000517006 107 ntBASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 AC022690.1-201ENST00000526681 550 ntBASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 OR5B19P-201ENST00000531766 928 ntBASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 AL049779.2-201ENST00000553847 315 ntBASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 SETP2-201ENST00000553886 926 ntBASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 AP005432.2-201ENST00000608162 586 ntBASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 AL354950.2-201ENST00000617939 290 ntBASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 GHR-202ENST00000357703 4316 ntTSL 5 BASIC6.11□□□□□ -1.43
BRPF3Q9ULD4 SAGE4P-201ENST00000442271 3381 ntBASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 AL122126.1-201ENST00000546905 1318 ntBASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 RPL7P26-201ENST00000333817 754 ntBASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 RNU4-79P-201ENST00000362764 141 ntBASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 RNU1-43P-201ENST00000365052 165 ntBASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 SNORD96B-201ENST00000386148 79 ntBASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 DUTP5-201ENST00000406790 469 ntBASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 RNU2-21P-201ENST00000410368 188 ntBASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 AC233702.1-201ENST00000482905 502 ntBASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 DEFB109F-201ENST00000491870 277 ntBASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 AC021146.1-201ENST00000511202 716 ntBASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 AC021146.3-201ENST00000511911 260 ntBASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 RN7SKP46-201ENST00000515942 234 ntBASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 AC093027.1-201ENST00000546698 429 ntBASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 AC078814.3-201ENST00000553036 491 ntBASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 AC087477.6-201ENST00000559595 843 ntBASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 RNF138P2-201ENST00000603490 592 ntBASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 LINC00901.1-201ENST00000617252 152 ntBASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 AC118658.2-201ENST00000618697 459 ntBASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 NEAT1-202ENST00000501122 22743 ntBASIC6.1□□□□□ -1.43
BRPF3Q9ULD4 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 PABPC1P6-201ENST00000445594 1829 ntBASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 NACAP2-201ENST00000318548 624 ntBASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 MIR1182-201ENST00000408363 97 ntBASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 UBE2V1P13-201ENST00000436983 439 ntBASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 RPL7P12-201ENST00000446719 750 ntBASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 CACYBPP2-201ENST00000453625 678 ntBASIC6.09□□□□□ -1.43
BRPF3Q9ULD4 Z92846.1-201ENST00000456203 268 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms