Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 RN7SKP234-201ENST00000517173 224 ntBASIC5.35□□□□□ -1.55
FOXD3Q9UJU5 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.35□□□□□ -1.55
FOXD3Q9UJU5 AP000676.2-201ENST00000529711 301 ntBASIC5.35□□□□□ -1.55
FOXD3Q9UJU5 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.35□□□□□ -1.55
FOXD3Q9UJU5 TVP23CP2-201ENST00000571473 623 ntBASIC5.35□□□□□ -1.55
FOXD3Q9UJU5 BNIP3P16-201ENST00000589779 534 ntBASIC5.35□□□□□ -1.55
FOXD3Q9UJU5 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.35□□□□□ -1.55
FOXD3Q9UJU5 AC104763.2-201ENST00000604179 382 ntBASIC5.35□□□□□ -1.55
FOXD3Q9UJU5 AL158032.1-201ENST00000605401 106 ntBASIC5.35□□□□□ -1.55
FOXD3Q9UJU5 DLEU2_5.1-201ENST00000615567 84 ntBASIC5.35□□□□□ -1.55
FOXD3Q9UJU5 AL122125.1-201ENST00000616999 600 ntBASIC5.35□□□□□ -1.55
FOXD3Q9UJU5 AC092608.2-201ENST00000624427 218 ntBASIC5.35□□□□□ -1.55
FOXD3Q9UJU5 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.35□□□□□ -1.55
FOXD3Q9UJU5 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
FOXD3Q9UJU5 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.35□□□□□ -1.55
FOXD3Q9UJU5 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
FOXD3Q9UJU5 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
FOXD3Q9UJU5 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
FOXD3Q9UJU5 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
FOXD3Q9UJU5 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
FOXD3Q9UJU5 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
FOXD3Q9UJU5 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
FOXD3Q9UJU5 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
FOXD3Q9UJU5 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.35□□□□□ -1.55
FOXD3Q9UJU5 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 BTBD10P1-201ENST00000549824 1352 ntBASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 AL121886.1-201ENST00000358609 435 ntBASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 RNU6-490P-201ENST00000362985 107 ntBASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 RN7SKP229-201ENST00000410465 302 ntBASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 AC114482.1-201ENST00000418010 247 ntBASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 RPL21P109-201ENST00000422213 475 ntBASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 AL121871.1-201ENST00000443413 436 ntBASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 H2AFZP6-201ENST00000444403 394 ntBASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 MRPL48P1-201ENST00000445390 636 ntBASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 DHFRP3-201ENST00000455595 559 ntBASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 AL136038.1-201ENST00000497246 351 ntBASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 MTND4LP22-201ENST00000508209 276 ntBASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 AC021146.3-201ENST00000511911 260 ntBASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 RNU6-1095P-201ENST00000516148 108 ntBASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 RNU6-1332P-201ENST00000516666 104 ntBASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 AC087854.1-201ENST00000519706 414 ntBASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 RNU6-323P-201ENST00000521915 107 ntBASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 AP006587.4-201ENST00000526053 529 ntBASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 AL161670.1-201ENST00000554348 137 ntBASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 MIR4776-2-201ENST00000580204 80 ntBASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 AC007485.1-201ENST00000616755 206 ntBASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 AL162373.1-201ENST00000620433 407 ntBASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 AC005725.1-201ENST00000577346 2607 ntBASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.34□□□□□ -1.55
FOXD3Q9UJU5 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
FOXD3Q9UJU5 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.34□□□□□ -1.56
FOXD3Q9UJU5 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.34□□□□□ -1.56
FOXD3Q9UJU5 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.56
FOXD3Q9UJU5 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.56
FOXD3Q9UJU5 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
FOXD3Q9UJU5 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 AL591135.1-201ENST00000401578 5914 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 OR13C1P-202ENST00000641378 2919 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 OR10R3P-201ENST00000361688 942 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 Y_RNA.47-201ENST00000362697 108 ntBASIC5.33□□□□□ -1.56
FOXD3Q9UJU5 RNU6-1155P-201ENST00000363554 107 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms