Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC009093.8-201ENST00000641769 292 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AC117529.2-201ENST00000512159 2068 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 OR5BR1P-201ENST00000524992 1330 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AL445523.1-201ENST00000451184 1362 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AP000526.1-201ENST00000603308 1388 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AP004289.2-201ENST00000444413 1457 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 AC024560.2-201ENST00000507981 1497 ntBASIC4.37□□□□□ -1.71
HDAC6Q9UBN7 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 U1.1-201ENST00000384101 164 ntBASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 SNORA5A-201ENST00000384111 134 ntBASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 RNU6-1200P-201ENST00000384162 107 ntBASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 MIR7-3-201ENST00000384898 110 ntBASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 SSXP10-201ENST00000402595 565 ntBASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 RPL18AP17-201ENST00000455326 198 ntBASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 snoU13.7-201ENST00000459220 104 ntBASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 AC104685.1-201ENST00000502445 371 ntBASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 AC111000.2-201ENST00000507775 550 ntBASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 AC093281.2-201ENST00000510153 597 ntBASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 XKRY-201ENST00000510392 1100 ntBASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 OR5BM1P-201ENST00000512021 366 ntBASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 AC090502.2-201ENST00000549267 280 ntBASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 AL389895.1-201ENST00000554127 252 ntBASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 AP000811.1-201ENST00000603803 651 ntBASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 AC104662.1-201ENST00000604448 511 ntBASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 AP001521.1-201ENST00000609150 300 ntBASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 AL713922.2-201ENST00000619384 716 ntBASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 AP000676.3-201ENST00000623299 569 ntBASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 AC004943.3-201ENST00000624116 600 ntBASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 AC092184.1-201ENST00000625042 715 ntBASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
HDAC6Q9UBN7 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 BDP1P-201ENST00000582658 1990 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 Y_RNA.18-201ENST00000362461 102 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 RPL21P17-201ENST00000397467 475 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 AC069218.2-201ENST00000411665 344 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 USP9YP33-201ENST00000412220 421 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 USP9YP26-201ENST00000421008 661 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 AC011233.1-201ENST00000422812 283 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 RPL36P19-201ENST00000430744 301 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 USP9YP35-201ENST00000435696 412 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 AL122001.1-201ENST00000457027 370 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 RNU7-125P-201ENST00000458760 62 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 RPL7P49-201ENST00000471402 708 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 RPS3AP43-201ENST00000479743 781 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 RNF138P1-201ENST00000502765 546 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 AC114981.1-201ENST00000503897 678 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 AC010342.1-201ENST00000514047 877 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 RNU6-583P-201ENST00000516012 92 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 GTF2IP22-201ENST00000554443 182 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 PIGPP4-201ENST00000584447 307 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 SNORD39.3-201ENST00000584451 71 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 AL163642.2-201ENST00000604722 1019 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 AL391497.1-201ENST00000608671 547 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 MIR486-1-201ENST00000612171 68 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 AL607023.1-201ENST00000620045 248 ntBASIC4.35□□□□□ -1.71
HDAC6Q9UBN7 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms