Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.22□□□□□ -2.05
COMMD3Q9UBI1 AC109635.4-202ENST00000531666 412 ntBASIC2.22□□□□□ -2.05
COMMD3Q9UBI1 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
COMMD3Q9UBI1 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.22□□□□□ -2.05
COMMD3Q9UBI1 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
COMMD3Q9UBI1 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.22□□□□□ -2.05
COMMD3Q9UBI1 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.22□□□□□ -2.05
COMMD3Q9UBI1 AL590282.1-201ENST00000610379 1136 ntBASIC2.22□□□□□ -2.05
COMMD3Q9UBI1 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.22□□□□□ -2.05
COMMD3Q9UBI1 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.22□□□□□ -2.05
COMMD3Q9UBI1 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
COMMD3Q9UBI1 AC005336.3-201ENST00000623833 2679 ntBASIC2.22□□□□□ -2.05
COMMD3Q9UBI1 AL512283.1-201ENST00000606756 1384 ntBASIC2.22□□□□□ -2.05
COMMD3Q9UBI1 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
COMMD3Q9UBI1 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
COMMD3Q9UBI1 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.22□□□□□ -2.05
COMMD3Q9UBI1 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 RPL21P132-201ENST00000331267 462 ntBASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 SNORA62.3-201ENST00000365110 153 ntBASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 SNORA80E-201ENST00000384744 137 ntBASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 AF274854.1-201ENST00000413236 615 ntBASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 RPL36AP36-201ENST00000418616 301 ntBASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 MTCO2P17-201ENST00000424336 677 ntBASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 SUMO1P4-201ENST00000429430 302 ntBASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 LSM1P1-201ENST00000438629 273 ntBASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 ELOCP13-201ENST00000443934 329 ntBASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 HMGB1P22-201ENST00000505315 124 ntBASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 ACTR6P1-201ENST00000514311 1104 ntBASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 RNA5SP468-201ENST00000516782 93 ntBASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 MTND2P26-201ENST00000528255 1029 ntBASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 AP002404.1-201ENST00000532005 451 ntBASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 AC087241.2-201ENST00000535801 324 ntBASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 AL020997.2-201ENST00000602607 184 ntBASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 AC016252.1-201ENST00000609721 474 ntBASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 AC011890.2-201ENST00000613393 294 ntBASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 AC090897.3-201ENST00000636973 1157 ntBASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
COMMD3Q9UBI1 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 AL049737.1-201ENST00000413920 1403 ntBASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 RNU1-112P-201ENST00000364401 164 ntBASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 SNORA14A-201ENST00000364773 135 ntBASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 PTMAP2-201ENST00000397627 327 ntBASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 AC025750.1-201ENST00000399891 379 ntBASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 AL356057.2-201ENST00000403318 432 ntBASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 SNORA11C-201ENST00000408532 129 ntBASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 RNU4-65P-201ENST00000410473 140 ntBASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 AL592148.1-201ENST00000413568 445 ntBASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 AC080125.1-201ENST00000414888 684 ntBASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 OR51AB1P-201ENST00000429046 620 ntBASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 AC017015.1-201ENST00000477387 286 ntBASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 AL133372.1-201ENST00000493565 745 ntBASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 HIGD1AP3-201ENST00000515857 278 ntBASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 OR4R1P-201ENST00000529879 463 ntBASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 AC128657.1-201ENST00000549459 145 ntBASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 AC074029.1-201ENST00000552531 1044 ntBASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 AC006539.2-201ENST00000601729 572 ntBASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 AC090525.3-201ENST00000605601 189 ntBASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 AC024560.3-201ENST00000608482 349 ntBASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 VIS1.1-201ENST00000610517 203 ntBASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 AC244100.1-202ENST00000621554 382 ntBASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 AC138915.1-201ENST00000565427 1685 ntBASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 MAPK10-266ENST00000641066 6555 ntBASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
COMMD3Q9UBI1 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 MIR144-201ENST00000384886 86 ntBASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 RNU6-244P-201ENST00000391028 104 ntBASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 U3.37-201ENST00000408528 213 ntBASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 RNU6-233P-201ENST00000410845 141 ntBASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 RNA5SP120-201ENST00000410900 112 ntBASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.19□□□□□ -2.06
COMMD3Q9UBI1 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms