Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CNTN3Q9P232 AL031119.1-201ENST00000404707 1879 ntBASIC5.77□□□□□ -1.49
CNTN3Q9P232 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CNTN3Q9P232 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CNTN3Q9P232 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.77□□□□□ -1.49
CNTN3Q9P232 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.76□□□□□ -1.49
CNTN3Q9P232 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.76□□□□□ -1.49
CNTN3Q9P232 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CNTN3Q9P232 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.76□□□□□ -1.49
CNTN3Q9P232 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CNTN3Q9P232 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CNTN3Q9P232 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CNTN3Q9P232 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CNTN3Q9P232 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CNTN3Q9P232 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.76□□□□□ -1.49
CNTN3Q9P232 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CNTN3Q9P232 RNU1-19P-201ENST00000363306 165 ntBASIC5.76□□□□□ -1.49
CNTN3Q9P232 RNA5SP391-201ENST00000363456 119 ntBASIC5.76□□□□□ -1.49
CNTN3Q9P232 RNU6-511P-201ENST00000363496 107 ntBASIC5.76□□□□□ -1.49
CNTN3Q9P232 RNU1-43P-201ENST00000365052 165 ntBASIC5.76□□□□□ -1.49
CNTN3Q9P232 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CNTN3Q9P232 AL359643.1-201ENST00000404109 423 ntBASIC5.76□□□□□ -1.49
CNTN3Q9P232 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.76□□□□□ -1.49
CNTN3Q9P232 MIR548F5-201ENST00000408421 86 ntBASIC5.76□□□□□ -1.49
CNTN3Q9P232 RN7SKP158-201ENST00000410453 326 ntBASIC5.76□□□□□ -1.49
CNTN3Q9P232 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.76□□□□□ -1.49
CNTN3Q9P232 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC5.76□□□□□ -1.49
CNTN3Q9P232 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.76□□□□□ -1.49
CNTN3Q9P232 PMCHL1-202ENST00000423102 261 ntBASIC5.76□□□□□ -1.49
CNTN3Q9P232 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.76□□□□□ -1.49
CNTN3Q9P232 AL359265.2-201ENST00000434367 631 ntBASIC5.76□□□□□ -1.49
CNTN3Q9P232 RPS20P1-201ENST00000434853 354 ntBASIC5.76□□□□□ -1.49
CNTN3Q9P232 RPL36AP6-201ENST00000435770 321 ntBASIC5.76□□□□□ -1.49
CNTN3Q9P232 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.76□□□□□ -1.49
CNTN3Q9P232 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.76□□□□□ -1.49
CNTN3Q9P232 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CNTN3Q9P232 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.76□□□□□ -1.49
CNTN3Q9P232 RNU7-59P-201ENST00000459101 61 ntBASIC5.76□□□□□ -1.49
CNTN3Q9P232 AL049874.2-201ENST00000492636 288 ntBASIC5.76□□□□□ -1.49
CNTN3Q9P232 AC025164.1-201ENST00000496249 478 ntBASIC5.76□□□□□ -1.49
CNTN3Q9P232 Y_RNA.654-201ENST00000497848 106 ntBASIC5.76□□□□□ -1.49
CNTN3Q9P232 AC020893.1-201ENST00000502452 580 ntBASIC5.76□□□□□ -1.49
CNTN3Q9P232 RPS4XP20-201ENST00000505751 772 ntBASIC5.76□□□□□ -1.49
CNTN3Q9P232 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.76□□□□□ -1.49
CNTN3Q9P232 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.76□□□□□ -1.49
CNTN3Q9P232 AC022790.1-201ENST00000522872 204 ntBASIC5.76□□□□□ -1.49
CNTN3Q9P232 APOOP3-201ENST00000536787 586 ntBASIC5.76□□□□□ -1.49
CNTN3Q9P232 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.76□□□□□ -1.49
CNTN3Q9P232 AC063950.1-201ENST00000552036 308 ntBASIC5.76□□□□□ -1.49
CNTN3Q9P232 RN7SL802P-201ENST00000577858 299 ntBASIC5.76□□□□□ -1.49
CNTN3Q9P232 MIR4512-201ENST00000583257 77 ntBASIC5.76□□□□□ -1.49
CNTN3Q9P232 MIR5690-201ENST00000583739 73 ntBASIC5.76□□□□□ -1.49
CNTN3Q9P232 uc_338.34-201ENST00000617467 174 ntBASIC5.76□□□□□ -1.49
CNTN3Q9P232 U6.114-201ENST00000636407 96 ntBASIC5.76□□□□□ -1.49
CNTN3Q9P232 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CNTN3Q9P232 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.76□□□□□ -1.49
CNTN3Q9P232 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.76□□□□□ -1.49
CNTN3Q9P232 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CNTN3Q9P232 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.76□□□□□ -1.49
CNTN3Q9P232 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.76□□□□□ -1.49
CNTN3Q9P232 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CNTN3Q9P232 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CNTN3Q9P232 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CNTN3Q9P232 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.75□□□□□ -1.49
CNTN3Q9P232 AP001029.2-203ENST00000589795 4910 ntBASIC5.75□□□□□ -1.49
CNTN3Q9P232 AL450326.2-201ENST00000421913 1962 ntBASIC5.75□□□□□ -1.49
CNTN3Q9P232 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CNTN3Q9P232 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.75□□□□□ -1.49
CNTN3Q9P232 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CNTN3Q9P232 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CNTN3Q9P232 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CNTN3Q9P232 AC011155.1-201ENST00000316512 456 ntBASIC5.75□□□□□ -1.49
CNTN3Q9P232 U8.4-201ENST00000363626 134 ntBASIC5.75□□□□□ -1.49
CNTN3Q9P232 SNORD113-7-201ENST00000363762 77 ntBASIC5.75□□□□□ -1.49
CNTN3Q9P232 SNORD82-201ENST00000365530 70 ntBASIC5.75□□□□□ -1.49
CNTN3Q9P232 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.75□□□□□ -1.49
CNTN3Q9P232 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CNTN3Q9P232 AL356057.3-201ENST00000402607 340 ntBASIC5.75□□□□□ -1.49
CNTN3Q9P232 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CNTN3Q9P232 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.75□□□□□ -1.49
CNTN3Q9P232 AC069213.2-201ENST00000420238 366 ntBASIC5.75□□□□□ -1.49
CNTN3Q9P232 GNG5P5-201ENST00000420444 220 ntBASIC5.75□□□□□ -1.49
CNTN3Q9P232 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.75□□□□□ -1.49
CNTN3Q9P232 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.75□□□□□ -1.49
CNTN3Q9P232 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.75□□□□□ -1.49
CNTN3Q9P232 EZH2P1-201ENST00000431167 291 ntBASIC5.75□□□□□ -1.49
CNTN3Q9P232 RPL12P18-201ENST00000437175 325 ntBASIC5.75□□□□□ -1.49
CNTN3Q9P232 AL118520.1-201ENST00000450770 291 ntBASIC5.75□□□□□ -1.49
CNTN3Q9P232 Z92846.1-201ENST00000456203 268 ntBASIC5.75□□□□□ -1.49
CNTN3Q9P232 AC079168.1-201ENST00000458741 345 ntBASIC5.75□□□□□ -1.49
CNTN3Q9P232 SNRPCP2-201ENST00000504370 475 ntBASIC5.75□□□□□ -1.49
CNTN3Q9P232 SMURF2P1-201ENST00000514992 481 ntBASIC5.75□□□□□ -1.49
CNTN3Q9P232 SNORA70.11-201ENST00000515987 138 ntBASIC5.75□□□□□ -1.49
CNTN3Q9P232 SNORA70.13-201ENST00000516116 138 ntBASIC5.75□□□□□ -1.49
CNTN3Q9P232 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.75□□□□□ -1.49
CNTN3Q9P232 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.75□□□□□ -1.49
CNTN3Q9P232 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC5.75□□□□□ -1.49
CNTN3Q9P232 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.75□□□□□ -1.49
CNTN3Q9P232 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.75□□□□□ -1.49
CNTN3Q9P232 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms