Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 RNA5SP311-201ENST00000411290 116 ntBASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 TPMTP3-201ENST00000411928 735 ntBASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 AMD1P2-201ENST00000412936 992 ntBASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 AC233981.1-201ENST00000423224 461 ntBASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 AL691449.1-201ENST00000426570 421 ntBASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 RSL24D1P6-201ENST00000426934 401 ntBASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 KATNBL1P6-201ENST00000453433 915 ntBASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 MTCO2P18-201ENST00000457151 658 ntBASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 AC013828.1-201ENST00000481845 158 ntBASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 MTCYBP17-201ENST00000503579 789 ntBASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 RNA5SP315-201ENST00000516340 116 ntBASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 RNA5SP312-201ENST00000517068 116 ntBASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 AC027309.2-201ENST00000520566 192 ntBASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 AC060788.1-201ENST00000521318 469 ntBASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 AC022695.1-201ENST00000522089 237 ntBASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 HIGD1AP10-201ENST00000527837 282 ntBASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 SERPINE4P-201ENST00000554978 281 ntBASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 MIR4738-201ENST00000579134 87 ntBASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 AC064872.1-201ENST00000604823 1072 ntBASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 AC103591.3-201ENST00000608684 209 ntBASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 AC008121.2-201ENST00000614647 523 ntBASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 AL713922.2-201ENST00000619384 716 ntBASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 DDX43P2-201ENST00000604753 1354 ntBASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 TNPO1P3-201ENST00000436471 2662 ntBASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SMARCAL1Q9NZC9 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SMARCAL1Q9NZC9 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SMARCAL1Q9NZC9 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
SMARCAL1Q9NZC9 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 RNU6-623P-201ENST00000363143 105 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 Y_RNA.194-201ENST00000363985 102 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 RNU6-374P-201ENST00000364146 108 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 RNU6-660P-201ENST00000364566 109 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 RNU4-75P-201ENST00000364621 146 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 RPL21P65-201ENST00000406094 466 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 RPS15AP38-201ENST00000413110 372 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 Z97055.1-201ENST00000419730 712 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 AC093698.1-201ENST00000423843 571 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 AC241584.1-201ENST00000438469 1241 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 MTND2P19-201ENST00000449129 1012 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 SLC31A1P1-201ENST00000451221 567 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 MRPS31P2-201ENST00000451581 518 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 ZNF114P1-201ENST00000453500 292 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 MTCO3P20-201ENST00000454926 688 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 RPL18AP17-201ENST00000455326 198 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 ARPC3P2-201ENST00000457786 533 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 AC091965.2-201ENST00000512324 613 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 MTCO1P35-201ENST00000515270 228 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 RNU6-488P-201ENST00000515918 99 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 RN7SKP96-201ENST00000516948 297 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 AC106038.2-201ENST00000520706 568 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 AC090502.2-201ENST00000549267 280 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 RSL24D1P11-201ENST00000591045 491 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 AC005255.1-201ENST00000593748 216 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 AC068790.2-201ENST00000602601 557 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 AC115621.1-201ENST00000604653 858 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 AC069304.2-201ENST00000605154 435 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 AC010680.4-201ENST00000605334 543 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 HSPE1P14-201ENST00000605812 302 ntBASIC3.96□□□□□ -1.78
SMARCAL1Q9NZC9 AC024560.3-201ENST00000608482 349 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms