Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 BDH2P1-201ENST00000602288 736 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 AC128687.1-201ENST00000605304 619 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 AC026741.1-201ENST00000605892 482 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 MIR7975-201ENST00000619350 68 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 AC006111.3-201ENST00000622137 383 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 AC091953.5-201ENST00000622919 233 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 AC095031.1-201ENST00000623685 672 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 AC244258.1-201ENST00000637553 1071 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 MTND2P41-201ENST00000637599 773 ntBASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.19□□□□□ -1.9
KLHL28Q9NXS3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 MTND5P1-201ENST00000445440 1375 ntBASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 MIR490-201ENST00000384865 128 ntBASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 RNU6-821P-201ENST00000390995 107 ntBASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 SKINT1L-201ENST00000401057 817 ntBASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 MTCO2P31-201ENST00000402702 684 ntBASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 RSL24D1P1-201ENST00000404972 493 ntBASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 AL035410.1-201ENST00000427409 427 ntBASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 AL445669.2-201ENST00000454425 421 ntBASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 HMGN1P18-201ENST00000457642 277 ntBASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 AC091179.1-201ENST00000461606 579 ntBASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 SNORA70.18-201ENST00000516696 98 ntBASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 MIR4789-201ENST00000577469 82 ntBASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 AC008121.2-201ENST00000614647 523 ntBASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 AL121594.5-201ENST00000631724 573 ntBASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 RIOK3P1-201ENST00000418778 1528 ntBASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 AP002907.1-201ENST00000606361 1430 ntBASIC3.18□□□□□ -1.9
KLHL28Q9NXS3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 RNU6-525P-201ENST00000363685 104 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 RNU6-115P-201ENST00000364310 107 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 OR1L1-202ENST00000373686 1083 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 MIR491-201ENST00000384877 84 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 RNU6-1077P-201ENST00000410506 102 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 RNA5SP107-201ENST00000411358 122 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 AL356968.1-201ENST00000416622 474 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 RPS6P14-201ENST00000425165 719 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 DEFB130D-201ENST00000426866 237 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 BX679664.1-201ENST00000434429 253 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 AC234064.1-201ENST00000436312 247 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 AL158053.1-201ENST00000441503 453 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 AC007967.1-201ENST00000455422 1159 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 TRBV26-201ENST00000456572 344 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 RPS4XP2-201ENST00000458402 793 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 HMGB1P25-201ENST00000468402 607 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 AC021205.2-201ENST00000480069 347 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 GAPDHP39-201ENST00000481866 979 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 AC118282.2-201ENST00000508739 374 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 AC048346.1-201ENST00000510247 144 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 AC105914.1-201ENST00000511798 226 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 AC239860.2-201ENST00000525886 270 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 AC022690.1-201ENST00000526681 550 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 AC103843.2-201ENST00000530523 682 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 AC007458.1-201ENST00000542812 373 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 COX6CP3-201ENST00000580869 223 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 AC011492.1-201ENST00000600023 315 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 AC073387.2-201ENST00000604797 784 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 AL136520.1-201ENST00000600311 1322 ntBASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
KLHL28Q9NXS3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms