Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 HIGD1AP1-201ENST00000550979 275 ntBASIC2.86□□□□□ -1.95
CLN6Q9NWW5 AC126177.3-201ENST00000551839 688 ntBASIC2.86□□□□□ -1.95
CLN6Q9NWW5 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CLN6Q9NWW5 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC2.86□□□□□ -1.95
CLN6Q9NWW5 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.86□□□□□ -1.95
CLN6Q9NWW5 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.86□□□□□ -1.95
CLN6Q9NWW5 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC2.86□□□□□ -1.95
CLN6Q9NWW5 MIR4789-201ENST00000577469 82 ntBASIC2.86□□□□□ -1.95
CLN6Q9NWW5 MIR3160-1-201ENST00000577972 85 ntBASIC2.86□□□□□ -1.95
CLN6Q9NWW5 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.86□□□□□ -1.95
CLN6Q9NWW5 AC124283.4-201ENST00000581815 456 ntBASIC2.86□□□□□ -1.95
CLN6Q9NWW5 GAS5-AS1-201ENST00000602767 694 ntBASIC2.86□□□□□ -1.95
CLN6Q9NWW5 AC009318.4-201ENST00000620496 486 ntBASIC2.86□□□□□ -1.95
CLN6Q9NWW5 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.86□□□□□ -1.95
CLN6Q9NWW5 AC068724.3-201ENST00000625906 87 ntBASIC2.86□□□□□ -1.95
CLN6Q9NWW5 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.86□□□□□ -1.95
CLN6Q9NWW5 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CLN6Q9NWW5 AL161912.2-201ENST00000565707 3007 ntBASIC2.86□□□□□ -1.95
CLN6Q9NWW5 AC244517.1-201ENST00000606030 2086 ntBASIC2.86□□□□□ -1.95
CLN6Q9NWW5 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.86□□□□□ -1.95
CLN6Q9NWW5 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CLN6Q9NWW5 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CLN6Q9NWW5 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CLN6Q9NWW5 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CLN6Q9NWW5 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CLN6Q9NWW5 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CLN6Q9NWW5 RNU6-609P-201ENST00000365459 107 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 SNORD82-201ENST00000365530 70 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 OR1L1-202ENST00000373686 1083 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 RNU6-932P-201ENST00000391108 106 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 RNU1-101P-201ENST00000391171 127 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 AL139098.1-201ENST00000407291 389 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.85□□□□□ -1.95
CLN6Q9NWW5 RNU6-712P-201ENST00000410558 100 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC2.85□□□□□ -1.95
CLN6Q9NWW5 BX842559.1-201ENST00000419615 532 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.85□□□□□ -1.95
CLN6Q9NWW5 DEFB130D-201ENST00000426866 237 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.85□□□□□ -1.95
CLN6Q9NWW5 AL035246.1-201ENST00000433554 1255 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 KCTD10P1-201ENST00000434203 625 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 AC122718.1-201ENST00000439448 744 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 OR51B8P-201ENST00000449892 769 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 RPS20P24-201ENST00000457473 361 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.85□□□□□ -1.95
CLN6Q9NWW5 RNU7-140P-201ENST00000459546 60 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 AC008379.1-201ENST00000463655 464 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 VPS26AP1-201ENST00000483197 979 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 RPL21P13-201ENST00000488305 481 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 RPL7P38-201ENST00000488396 739 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 RPL7P23-201ENST00000493874 747 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.85□□□□□ -1.95
CLN6Q9NWW5 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CLN6Q9NWW5 AP000790.1-201ENST00000528891 737 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 AP000619.3-201ENST00000535634 1127 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 SNORD84-203ENST00000584275 78 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 MIR4276-201ENST00000584832 70 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.85□□□□□ -1.95
CLN6Q9NWW5 VN1R85P-201ENST00000601587 426 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 AC002487.1-201ENST00000604565 994 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 uc_338.25-201ENST00000613756 156 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 AC068831.7-201ENST00000616954 363 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 AC040168.1-201ENST00000623594 991 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 AC095031.1-201ENST00000623685 672 ntBASIC2.85□□□□□ -1.95
CLN6Q9NWW5 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CLN6Q9NWW5 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.85□□□□□ -1.95
CLN6Q9NWW5 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CLN6Q9NWW5 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.85□□□□□ -1.95
CLN6Q9NWW5 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CLN6Q9NWW5 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.84□□□□□ -1.95
CLN6Q9NWW5 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.84□□□□□ -1.95
CLN6Q9NWW5 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CLN6Q9NWW5 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.84□□□□□ -1.95
CLN6Q9NWW5 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
CLN6Q9NWW5 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CLN6Q9NWW5 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
CLN6Q9NWW5 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CLN6Q9NWW5 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CLN6Q9NWW5 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.84□□□□□ -1.95
CLN6Q9NWW5 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CLN6Q9NWW5 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CLN6Q9NWW5 SAR1AP2-201ENST00000392696 594 ntBASIC2.84□□□□□ -1.95
CLN6Q9NWW5 AC110754.1-201ENST00000399740 601 ntBASIC2.84□□□□□ -1.95
CLN6Q9NWW5 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.84□□□□□ -1.95
CLN6Q9NWW5 AL133384.1-201ENST00000412744 351 ntBASIC2.84□□□□□ -1.95
CLN6Q9NWW5 TAF13P2-201ENST00000416876 286 ntBASIC2.84□□□□□ -1.95
CLN6Q9NWW5 DPPA2P1-201ENST00000428060 556 ntBASIC2.84□□□□□ -1.95
CLN6Q9NWW5 GOT2P5-201ENST00000433995 546 ntBASIC2.84□□□□□ -1.95
CLN6Q9NWW5 AL590762.3-201ENST00000436372 640 ntBASIC2.84□□□□□ -1.95
CLN6Q9NWW5 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.84□□□□□ -1.95
CLN6Q9NWW5 GAPDHP27-201ENST00000447427 1020 ntBASIC2.84□□□□□ -1.95
CLN6Q9NWW5 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.84□□□□□ -1.95
CLN6Q9NWW5 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.84□□□□□ -1.95
CLN6Q9NWW5 MTCO3P2-201ENST00000457365 171 ntBASIC2.84□□□□□ -1.95
CLN6Q9NWW5 RPL7P15-201ENST00000461190 712 ntBASIC2.84□□□□□ -1.95
CLN6Q9NWW5 RPL32P14-201ENST00000463196 378 ntBASIC2.84□□□□□ -1.95
CLN6Q9NWW5 RPL21P8-201ENST00000465083 535 ntBASIC2.84□□□□□ -1.95
CLN6Q9NWW5 PABPC1P3-201ENST00000469174 459 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms