Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC107871.2-201ENST00000612894 502 ntBASIC2.34□□□□□ -2.04
KIAA1549Q9HCM3 AC005156.1-201ENST00000613371 573 ntBASIC2.34□□□□□ -2.04
KIAA1549Q9HCM3 MIR7973-1-201ENST00000614683 76 ntBASIC2.34□□□□□ -2.04
KIAA1549Q9HCM3 AL589935.2-201ENST00000616471 1231 ntBASIC2.34□□□□□ -2.04
KIAA1549Q9HCM3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
KIAA1549Q9HCM3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.34□□□□□ -2.04
KIAA1549Q9HCM3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
KIAA1549Q9HCM3 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.33□□□□□ -2.04
KIAA1549Q9HCM3 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
KIAA1549Q9HCM3 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.33□□□□□ -2.04
KIAA1549Q9HCM3 MTCYBP7-201ENST00000419540 1134 ntBASIC2.33□□□□□ -2.04
KIAA1549Q9HCM3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.33□□□□□ -2.04
KIAA1549Q9HCM3 AC244505.4-201ENST00000434905 287 ntBASIC2.33□□□□□ -2.04
KIAA1549Q9HCM3 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.33□□□□□ -2.04
KIAA1549Q9HCM3 SSXP5-201ENST00000443473 287 ntBASIC2.33□□□□□ -2.04
KIAA1549Q9HCM3 RPL31P53-201ENST00000457065 348 ntBASIC2.33□□□□□ -2.04
KIAA1549Q9HCM3 AC008571.1-201ENST00000467232 300 ntBASIC2.33□□□□□ -2.04
KIAA1549Q9HCM3 AC126182.1-201ENST00000478134 357 ntBASIC2.33□□□□□ -2.04
KIAA1549Q9HCM3 RN7SL499P-201ENST00000481141 276 ntBASIC2.33□□□□□ -2.04
KIAA1549Q9HCM3 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.33□□□□□ -2.04
KIAA1549Q9HCM3 HMGB3P15-201ENST00000507326 574 ntBASIC2.33□□□□□ -2.04
KIAA1549Q9HCM3 TMEM248P1-201ENST00000510579 951 ntBASIC2.33□□□□□ -2.04
KIAA1549Q9HCM3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
KIAA1549Q9HCM3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.33□□□□□ -2.04
KIAA1549Q9HCM3 AC106734.1-201ENST00000568646 663 ntBASIC2.33□□□□□ -2.04
KIAA1549Q9HCM3 MIR6817-201ENST00000615588 66 ntBASIC2.33□□□□□ -2.04
KIAA1549Q9HCM3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.33□□□□□ -2.04
KIAA1549Q9HCM3 CRYM-AS1-204ENST00000637983 556 ntBASIC2.33□□□□□ -2.04
KIAA1549Q9HCM3 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
KIAA1549Q9HCM3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
KIAA1549Q9HCM3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 RNA5SP210-201ENST00000391034 120 ntBASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 GSTA12P-201ENST00000402398 508 ntBASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 MRPL50P2-201ENST00000416821 482 ntBASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 RPS24P8-201ENST00000431490 402 ntBASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 NPM1P49-201ENST00000448027 714 ntBASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 SNRPGP3-201ENST00000469405 227 ntBASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 AC096725.1-201ENST00000514266 313 ntBASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 HPRT1P3-201ENST00000539521 576 ntBASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 AC069234.5-201ENST00000611056 416 ntBASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 AC087565.3-202ENST00000642085 1603 ntBASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 RNU6-1251P-201ENST00000364502 107 ntBASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 RNU2-71P-201ENST00000411395 189 ntBASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 AC012181.1-201ENST00000479895 423 ntBASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 AC010486.1-201ENST00000511793 424 ntBASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 RNU4-60P-201ENST00000517239 135 ntBASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 AL133271.1-201ENST00000538229 291 ntBASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 MTND4LP24-201ENST00000572277 291 ntBASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 MIR5092-201ENST00000583139 88 ntBASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 PCNAP1-202ENST00000595299 752 ntBASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 SEPT7P7-201ENST00000420492 1301 ntBASIC2.32□□□□□ -2.04
KIAA1549Q9HCM3 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.31□□□□□ -2.04
KIAA1549Q9HCM3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.31□□□□□ -2.04
KIAA1549Q9HCM3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
KIAA1549Q9HCM3 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
KIAA1549Q9HCM3 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.31□□□□□ -2.04
KIAA1549Q9HCM3 HSPE1P28-201ENST00000443139 211 ntBASIC2.31□□□□□ -2.04
KIAA1549Q9HCM3 MRPL50P4-201ENST00000446432 475 ntBASIC2.31□□□□□ -2.04
KIAA1549Q9HCM3 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.31□□□□□ -2.04
KIAA1549Q9HCM3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.31□□□□□ -2.04
KIAA1549Q9HCM3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.31□□□□□ -2.04
KIAA1549Q9HCM3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
KIAA1549Q9HCM3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.31□□□□□ -2.04
KIAA1549Q9HCM3 AC010928.3-201ENST00000587712 541 ntBASIC2.31□□□□□ -2.04
KIAA1549Q9HCM3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.31□□□□□ -2.04
KIAA1549Q9HCM3 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
KIAA1549Q9HCM3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.31□□□□□ -2.04
KIAA1549Q9HCM3 ELF2P3-201ENST00000445099 1506 ntBASIC2.31□□□□□ -2.04
KIAA1549Q9HCM3 AC004944.1-201ENST00000517807 3059 ntBASIC2.31□□□□□ -2.04
KIAA1549Q9HCM3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KIAA1549Q9HCM3 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.31□□□□□ -2.04
KIAA1549Q9HCM3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KIAA1549Q9HCM3 RNU1-100P-201ENST00000365255 165 ntBASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 BTF3P7-201ENST00000407097 488 ntBASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 RPS20P25-201ENST00000412447 352 ntBASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 NECAP1P2-201ENST00000455668 727 ntBASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 TRBV12-1-201ENST00000479785 344 ntBASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 AC005912.1-201ENST00000495392 255 ntBASIC2.3□□□□□ -2.04
KIAA1549Q9HCM3 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms