Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
CHD8Q9HCK8 AC109315.1-201ENST00000584143 1347 ntBASIC2.32□□□□□ -2.04
CHD8Q9HCK8 Z82209.1-201ENST00000422141 2135 ntBASIC2.32□□□□□ -2.04
CHD8Q9HCK8 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CHD8Q9HCK8 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CHD8Q9HCK8 RNU6-457P-201ENST00000363999 107 ntBASIC2.32□□□□□ -2.04
CHD8Q9HCK8 MIR93-201ENST00000385024 80 ntBASIC2.32□□□□□ -2.04
CHD8Q9HCK8 RNU4-62P-201ENST00000410125 130 ntBASIC2.32□□□□□ -2.04
CHD8Q9HCK8 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.32□□□□□ -2.04
CHD8Q9HCK8 HMGB1P16-201ENST00000447155 540 ntBASIC2.32□□□□□ -2.04
CHD8Q9HCK8 MTND2P25-201ENST00000449028 610 ntBASIC2.32□□□□□ -2.04
CHD8Q9HCK8 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CHD8Q9HCK8 SNORA31.1-201ENST00000515993 133 ntBASIC2.32□□□□□ -2.04
CHD8Q9HCK8 SNORA31.5-201ENST00000516190 133 ntBASIC2.32□□□□□ -2.04
CHD8Q9HCK8 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC2.32□□□□□ -2.04
CHD8Q9HCK8 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC2.32□□□□□ -2.04
CHD8Q9HCK8 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CHD8Q9HCK8 RPS3AP4-201ENST00000555161 764 ntBASIC2.32□□□□□ -2.04
CHD8Q9HCK8 OR4H12P-201ENST00000556269 907 ntBASIC2.32□□□□□ -2.04
CHD8Q9HCK8 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC2.32□□□□□ -2.04
CHD8Q9HCK8 AC010620.2-201ENST00000600135 313 ntBASIC2.32□□□□□ -2.04
CHD8Q9HCK8 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.32□□□□□ -2.04
CHD8Q9HCK8 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CHD8Q9HCK8 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
CHD8Q9HCK8 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CHD8Q9HCK8 RPS6P2-201ENST00000454208 705 ntBASIC2.31□□□□□ -2.04
CHD8Q9HCK8 RPL23AP31-201ENST00000456160 467 ntBASIC2.31□□□□□ -2.04
CHD8Q9HCK8 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.31□□□□□ -2.04
CHD8Q9HCK8 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC2.31□□□□□ -2.04
CHD8Q9HCK8 PVT1_3.1-201ENST00000620853 95 ntBASIC2.31□□□□□ -2.04
CHD8Q9HCK8 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CHD8Q9HCK8 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
CHD8Q9HCK8 HMGB1P19-201ENST00000517578 577 ntBASIC2.31□□□□□ -2.04
CHD8Q9HCK8 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.31□□□□□ -2.04
CHD8Q9HCK8 LRRC37A5P-203ENST00000580181 585 ntBASIC2.31□□□□□ -2.04
CHD8Q9HCK8 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.31□□□□□ -2.04
CHD8Q9HCK8 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC2.31□□□□□ -2.04
CHD8Q9HCK8 MIR6895-201ENST00000613497 78 ntBASIC2.31□□□□□ -2.04
CHD8Q9HCK8 MIR6734-201ENST00000621166 68 ntBASIC2.31□□□□□ -2.04
CHD8Q9HCK8 AC092326.2-201ENST00000624772 1561 ntBASIC2.3□□□□□ -2.04
CHD8Q9HCK8 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
CHD8Q9HCK8 SNORA31-201ENST00000362607 130 ntBASIC2.3□□□□□ -2.04
CHD8Q9HCK8 RNU1-35P-201ENST00000362782 153 ntBASIC2.3□□□□□ -2.04
CHD8Q9HCK8 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CHD8Q9HCK8 RNA5SP270-201ENST00000411361 118 ntBASIC2.3□□□□□ -2.04
CHD8Q9HCK8 AC098934.3-201ENST00000430450 190 ntBASIC2.3□□□□□ -2.04
CHD8Q9HCK8 AL450263.2-201ENST00000439400 589 ntBASIC2.3□□□□□ -2.04
CHD8Q9HCK8 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.3□□□□□ -2.04
CHD8Q9HCK8 AC079776.3-201ENST00000450665 370 ntBASIC2.3□□□□□ -2.04
CHD8Q9HCK8 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC2.3□□□□□ -2.04
CHD8Q9HCK8 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.3□□□□□ -2.04
CHD8Q9HCK8 AC010546.1-201ENST00000569391 485 ntBASIC2.3□□□□□ -2.04
CHD8Q9HCK8 AL359715.5-201ENST00000623431 443 ntBASIC2.3□□□□□ -2.04
CHD8Q9HCK8 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
CHD8Q9HCK8 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.3□□□□□ -2.04
CHD8Q9HCK8 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.3□□□□□ -2.04
CHD8Q9HCK8 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CHD8Q9HCK8 SNORA51.12-201ENST00000384448 134 ntBASIC2.3□□□□□ -2.04
CHD8Q9HCK8 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
CHD8Q9HCK8 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
CHD8Q9HCK8 HNRNPKP5-201ENST00000515300 253 ntBASIC2.3□□□□□ -2.04
CHD8Q9HCK8 RN7SKP40-201ENST00000517211 242 ntBASIC2.3□□□□□ -2.04
CHD8Q9HCK8 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC2.3□□□□□ -2.04
CHD8Q9HCK8 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.3□□□□□ -2.04
CHD8Q9HCK8 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC2.3□□□□□ -2.04
CHD8Q9HCK8 AC002064.3-201ENST00000623448 346 ntBASIC2.3□□□□□ -2.04
CHD8Q9HCK8 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CHD8Q9HCK8 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CHD8Q9HCK8 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CHD8Q9HCK8 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
CHD8Q9HCK8 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CHD8Q9HCK8 AL160275.2-201ENST00000412010 394 ntBASIC2.29□□□□□ -2.04
CHD8Q9HCK8 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.29□□□□□ -2.04
CHD8Q9HCK8 RPS29P6-201ENST00000438196 145 ntBASIC2.29□□□□□ -2.04
CHD8Q9HCK8 RPL23AP49-201ENST00000492925 468 ntBASIC2.29□□□□□ -2.04
CHD8Q9HCK8 OR5H3P-201ENST00000502817 919 ntBASIC2.29□□□□□ -2.04
CHD8Q9HCK8 AC006111.3-201ENST00000622137 383 ntBASIC2.29□□□□□ -2.04
CHD8Q9HCK8 AC025125.1-201ENST00000624743 1922 ntBASIC2.29□□□□□ -2.04
CHD8Q9HCK8 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC2.29□□□□□ -2.04
CHD8Q9HCK8 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CHD8Q9HCK8 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CHD8Q9HCK8 Y_RNA.303-201ENST00000364998 94 ntBASIC2.29□□□□□ -2.04
CHD8Q9HCK8 NDUFB4P6-201ENST00000436819 366 ntBASIC2.29□□□□□ -2.04
CHD8Q9HCK8 RPL23AP58-201ENST00000440453 469 ntBASIC2.29□□□□□ -2.04
CHD8Q9HCK8 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.29□□□□□ -2.04
CHD8Q9HCK8 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.29□□□□□ -2.04
CHD8Q9HCK8 VN1R80P-201ENST00000597126 338 ntBASIC2.29□□□□□ -2.04
CHD8Q9HCK8 AC103710.2-201ENST00000609912 942 ntBASIC2.29□□□□□ -2.04
CHD8Q9HCK8 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.29□□□□□ -2.04
CHD8Q9HCK8 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.29□□□□□ -2.04
CHD8Q9HCK8 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
CHD8Q9HCK8 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.28□□□□□ -2.04
CHD8Q9HCK8 CYCSP20-201ENST00000473154 315 ntBASIC2.28□□□□□ -2.04
CHD8Q9HCK8 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.28□□□□□ -2.04
CHD8Q9HCK8 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.28□□□□□ -2.04
CHD8Q9HCK8 WISP1-OT1-201ENST00000602893 642 ntBASIC2.28□□□□□ -2.04
CHD8Q9HCK8 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.28□□□□□ -2.04
CHD8Q9HCK8 AC138627.1-204ENST00000641894 765 ntBASIC2.28□□□□□ -2.04
CHD8Q9HCK8 AC011978.2-201ENST00000569835 2054 ntBASIC2.28□□□□□ -2.04
CHD8Q9HCK8 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms