Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
TRIM4Q9C037 AC006023.2-201ENST00000609916 167 ntBASIC3.02□□□□□ -1.93
TRIM4Q9C037 MIR7973-1-201ENST00000614683 76 ntBASIC3.02□□□□□ -1.93
TRIM4Q9C037 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM4Q9C037 MIR7843-201ENST00000622274 79 ntBASIC3.02□□□□□ -1.93
TRIM4Q9C037 AC009950.2-201ENST00000636548 183 ntBASIC3.02□□□□□ -1.93
TRIM4Q9C037 AC010149.2-201ENST00000637608 315 ntBASIC3.02□□□□□ -1.93
TRIM4Q9C037 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.02□□□□□ -1.93
TRIM4Q9C037 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
TRIM4Q9C037 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
TRIM4Q9C037 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TRIM4Q9C037 OR5J1P-201ENST00000313544 939 ntBASIC3.01□□□□□ -1.93
TRIM4Q9C037 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TRIM4Q9C037 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
TRIM4Q9C037 RPS12P18-201ENST00000442381 270 ntBASIC3.01□□□□□ -1.93
TRIM4Q9C037 OR7L1P-201ENST00000456181 380 ntBASIC3.01□□□□□ -1.93
TRIM4Q9C037 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.01□□□□□ -1.93
TRIM4Q9C037 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.01□□□□□ -1.93
TRIM4Q9C037 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.01□□□□□ -1.93
TRIM4Q9C037 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.01□□□□□ -1.93
TRIM4Q9C037 AC091544.4-201ENST00000555268 342 ntBASIC3.01□□□□□ -1.93
TRIM4Q9C037 AADACP1-206ENST00000561502 1193 ntBASIC3.01□□□□□ -1.93
TRIM4Q9C037 AC083760.1-201ENST00000589621 670 ntBASIC3.01□□□□□ -1.93
TRIM4Q9C037 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.01□□□□□ -1.93
TRIM4Q9C037 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.01□□□□□ -1.93
TRIM4Q9C037 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3□□□□□ -1.93
TRIM4Q9C037 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TRIM4Q9C037 AL359693.1-201ENST00000614959 2407 ntBASIC3□□□□□ -1.93
TRIM4Q9C037 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
TRIM4Q9C037 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3□□□□□ -1.93
TRIM4Q9C037 AL513477.1-202ENST00000417061 214 ntBASIC3□□□□□ -1.93
TRIM4Q9C037 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3□□□□□ -1.93
TRIM4Q9C037 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3□□□□□ -1.93
TRIM4Q9C037 AC005189.1-201ENST00000431286 310 ntBASIC3□□□□□ -1.93
TRIM4Q9C037 RPS24P8-201ENST00000431490 402 ntBASIC3□□□□□ -1.93
TRIM4Q9C037 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3□□□□□ -1.93
TRIM4Q9C037 AC108734.1-201ENST00000439549 399 ntBASIC3□□□□□ -1.93
TRIM4Q9C037 AC010095.1-201ENST00000443543 144 ntBASIC3□□□□□ -1.93
TRIM4Q9C037 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3□□□□□ -1.93
TRIM4Q9C037 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3□□□□□ -1.93
TRIM4Q9C037 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3□□□□□ -1.93
TRIM4Q9C037 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3□□□□□ -1.93
TRIM4Q9C037 CCNHP1-201ENST00000513311 678 ntBASIC3□□□□□ -1.93
TRIM4Q9C037 ACTR6P1-201ENST00000514311 1104 ntBASIC3□□□□□ -1.93
TRIM4Q9C037 AC008885.1-201ENST00000514930 301 ntBASIC3□□□□□ -1.93
TRIM4Q9C037 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3□□□□□ -1.93
TRIM4Q9C037 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3□□□□□ -1.93
TRIM4Q9C037 MTND4LP24-201ENST00000572277 291 ntBASIC3□□□□□ -1.93
TRIM4Q9C037 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3□□□□□ -1.93
TRIM4Q9C037 AC010615.3-201ENST00000597319 394 ntBASIC3□□□□□ -1.93
TRIM4Q9C037 DUXAP4-201ENST00000603046 613 ntBASIC3□□□□□ -1.93
TRIM4Q9C037 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3□□□□□ -1.93
TRIM4Q9C037 AC139713.2-210ENST00000641741 992 ntBASIC3□□□□□ -1.93
TRIM4Q9C037 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3□□□□□ -1.93
TRIM4Q9C037 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3□□□□□ -1.93
TRIM4Q9C037 MTND5P3-201ENST00000438536 1800 ntBASIC3□□□□□ -1.93
TRIM4Q9C037 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
TRIM4Q9C037 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
TRIM4Q9C037 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TRIM4Q9C037 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3□□□□□ -1.93
TRIM4Q9C037 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3□□□□□ -1.93
TRIM4Q9C037 MAPK10-322ENST00000641485 4530 ntBASIC3□□□□□ -1.93
TRIM4Q9C037 ASNSP3-201ENST00000451989 1306 ntBASIC2.99□□□□□ -1.93
TRIM4Q9C037 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TRIM4Q9C037 SNORA51.2-201ENST00000364595 132 ntBASIC2.99□□□□□ -1.93
TRIM4Q9C037 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.99□□□□□ -1.93
TRIM4Q9C037 ATG3P1-201ENST00000419507 911 ntBASIC2.99□□□□□ -1.93
TRIM4Q9C037 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TRIM4Q9C037 AC022018.1-201ENST00000430685 241 ntBASIC2.99□□□□□ -1.93
TRIM4Q9C037 RPL21P112-201ENST00000434403 463 ntBASIC2.99□□□□□ -1.93
TRIM4Q9C037 EEF1B2P7-201ENST00000451177 676 ntBASIC2.99□□□□□ -1.93
TRIM4Q9C037 ELOCP23-201ENST00000452014 332 ntBASIC2.99□□□□□ -1.93
TRIM4Q9C037 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.99□□□□□ -1.93
TRIM4Q9C037 RPL9P33-201ENST00000484311 566 ntBASIC2.99□□□□□ -1.93
TRIM4Q9C037 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.99□□□□□ -1.93
TRIM4Q9C037 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
TRIM4Q9C037 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.99□□□□□ -1.93
TRIM4Q9C037 RN7SKP244-201ENST00000516513 307 ntBASIC2.99□□□□□ -1.93
TRIM4Q9C037 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TRIM4Q9C037 ELOCP31-201ENST00000540463 467 ntBASIC2.99□□□□□ -1.93
TRIM4Q9C037 HIGD1AP1-201ENST00000550979 275 ntBASIC2.99□□□□□ -1.93
TRIM4Q9C037 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.99□□□□□ -1.93
TRIM4Q9C037 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.99□□□□□ -1.93
TRIM4Q9C037 MIR4319-201ENST00000577285 85 ntBASIC2.99□□□□□ -1.93
TRIM4Q9C037 VN1R90P-201ENST00000595717 726 ntBASIC2.99□□□□□ -1.93
TRIM4Q9C037 AC091057.2-201ENST00000602594 792 ntBASIC2.99□□□□□ -1.93
TRIM4Q9C037 uc_338.25-201ENST00000613756 156 ntBASIC2.99□□□□□ -1.93
TRIM4Q9C037 AL157817.1-201ENST00000614264 790 ntBASIC2.99□□□□□ -1.93
TRIM4Q9C037 AC011472.4-201ENST00000615848 491 ntBASIC2.99□□□□□ -1.93
TRIM4Q9C037 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.99□□□□□ -1.93
TRIM4Q9C037 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.99□□□□□ -1.93
TRIM4Q9C037 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
TRIM4Q9C037 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
TRIM4Q9C037 RNA5SP391-201ENST00000363456 119 ntBASIC2.98□□□□□ -1.93
TRIM4Q9C037 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.98□□□□□ -1.93
TRIM4Q9C037 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
TRIM4Q9C037 EI24P1-201ENST00000416584 867 ntBASIC2.98□□□□□ -1.93
TRIM4Q9C037 BTF3P9-201ENST00000418784 283 ntBASIC2.98□□□□□ -1.93
TRIM4Q9C037 NDUFA5P10-201ENST00000432147 357 ntBASIC2.98□□□□□ -1.93
TRIM4Q9C037 AC023347.2-201ENST00000433994 462 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 162.6 ms