Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AP001207.1-201ENST00000524051 481 ntBASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 FAM60DP-201ENST00000524174 632 ntBASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 MIR3690-201ENST00000580266 75 ntBASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 MIR4506-201ENST00000584693 77 ntBASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 AL355596.1-201ENST00000565399 3996 ntBASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 AC002546.1-201ENST00000588041 2504 ntBASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 AL359693.1-201ENST00000614959 2407 ntBASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
UPF3BQ9BZI7 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.4□□□□□ -1.86
UPF3BQ9BZI7 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
UPF3BQ9BZI7 SNORA51.2-201ENST00000364595 132 ntBASIC3.4□□□□□ -1.87
UPF3BQ9BZI7 SNORA9.2-201ENST00000365361 133 ntBASIC3.4□□□□□ -1.87
UPF3BQ9BZI7 MIR512-1-201ENST00000384913 84 ntBASIC3.4□□□□□ -1.87
UPF3BQ9BZI7 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
UPF3BQ9BZI7 AL590004.2-201ENST00000404787 371 ntBASIC3.4□□□□□ -1.87
UPF3BQ9BZI7 RN7SKP123-201ENST00000410732 291 ntBASIC3.4□□□□□ -1.87
UPF3BQ9BZI7 RNA5SP508-201ENST00000411327 119 ntBASIC3.4□□□□□ -1.87
UPF3BQ9BZI7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.4□□□□□ -1.87
UPF3BQ9BZI7 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.4□□□□□ -1.87
UPF3BQ9BZI7 AC022018.1-201ENST00000430685 241 ntBASIC3.4□□□□□ -1.87
UPF3BQ9BZI7 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC3.4□□□□□ -1.87
UPF3BQ9BZI7 RPS4XP13-201ENST00000483219 789 ntBASIC3.4□□□□□ -1.87
UPF3BQ9BZI7 DYNLL1P6-201ENST00000503440 264 ntBASIC3.4□□□□□ -1.87
UPF3BQ9BZI7 AC021087.2-201ENST00000504656 1203 ntBASIC3.4□□□□□ -1.87
UPF3BQ9BZI7 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.4□□□□□ -1.87
UPF3BQ9BZI7 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.4□□□□□ -1.87
UPF3BQ9BZI7 AC034268.2-201ENST00000571784 482 ntBASIC3.4□□□□□ -1.87
UPF3BQ9BZI7 AC078899.3-201ENST00000599065 212 ntBASIC3.4□□□□□ -1.87
UPF3BQ9BZI7 AC104763.2-201ENST00000604179 382 ntBASIC3.4□□□□□ -1.87
UPF3BQ9BZI7 AC091488.1-201ENST00000604239 660 ntBASIC3.4□□□□□ -1.87
UPF3BQ9BZI7 AC006023.2-201ENST00000609916 167 ntBASIC3.4□□□□□ -1.87
UPF3BQ9BZI7 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
UPF3BQ9BZI7 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
UPF3BQ9BZI7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
UPF3BQ9BZI7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.4□□□□□ -1.87
UPF3BQ9BZI7 RNA5SP391-201ENST00000363456 119 ntBASIC3.39□□□□□ -1.87
UPF3BQ9BZI7 SAR1AP2-201ENST00000392696 594 ntBASIC3.39□□□□□ -1.87
UPF3BQ9BZI7 AC244098.2-201ENST00000422068 99 ntBASIC3.39□□□□□ -1.87
UPF3BQ9BZI7 VDAC1P3-201ENST00000434069 851 ntBASIC3.39□□□□□ -1.87
UPF3BQ9BZI7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.39□□□□□ -1.87
UPF3BQ9BZI7 AL592437.1-201ENST00000443781 492 ntBASIC3.39□□□□□ -1.87
UPF3BQ9BZI7 AC093392.2-201ENST00000450682 337 ntBASIC3.39□□□□□ -1.87
UPF3BQ9BZI7 ARPC3P2-201ENST00000457786 533 ntBASIC3.39□□□□□ -1.87
UPF3BQ9BZI7 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.39□□□□□ -1.87
UPF3BQ9BZI7 RPS29P26-201ENST00000477483 171 ntBASIC3.39□□□□□ -1.87
UPF3BQ9BZI7 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.39□□□□□ -1.87
UPF3BQ9BZI7 AC090115.4-201ENST00000609970 188 ntBASIC3.39□□□□□ -1.87
UPF3BQ9BZI7 AC084035.1-201ENST00000634543 607 ntBASIC3.39□□□□□ -1.87
UPF3BQ9BZI7 AC092593.1-201ENST00000515413 1815 ntBASIC3.39□□□□□ -1.87
UPF3BQ9BZI7 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
UPF3BQ9BZI7 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.39□□□□□ -1.87
UPF3BQ9BZI7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
UPF3BQ9BZI7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 RNU4-82P-201ENST00000362443 140 ntBASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 AC234782.4-201ENST00000417646 1048 ntBASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 AL390023.1-201ENST00000428836 262 ntBASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 AC073508.1-201ENST00000428866 656 ntBASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 AC003982.1-202ENST00000469928 248 ntBASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 VN1R17P-201ENST00000472048 1090 ntBASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 AC012181.1-201ENST00000479895 423 ntBASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 RNA5SP367-201ENST00000516557 118 ntBASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 AC023158.1-201ENST00000561632 1025 ntBASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 AC107871.2-201ENST00000612894 502 ntBASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 AC010338.1-201ENST00000621823 717 ntBASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 AL136164.4-201ENST00000625013 2135 ntBASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 MTND4P34-201ENST00000572715 1371 ntBASIC3.38□□□□□ -1.87
UPF3BQ9BZI7 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 RNU6-452P-201ENST00000384406 107 ntBASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 RNA5SP184-201ENST00000411071 108 ntBASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 AC112653.1-201ENST00000443851 386 ntBASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 AL590399.6-201ENST00000446396 307 ntBASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 GAPDHP27-201ENST00000447427 1020 ntBASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 AL513124.1-201ENST00000450410 614 ntBASIC3.37□□□□□ -1.87
UPF3BQ9BZI7 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms