Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
SCAPERQ9BY12 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SCAPERQ9BY12 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.68□□□□□ -1.82
SCAPERQ9BY12 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.68□□□□□ -1.82
SCAPERQ9BY12 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SCAPERQ9BY12 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.68□□□□□ -1.82
SCAPERQ9BY12 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.68□□□□□ -1.82
SCAPERQ9BY12 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.68□□□□□ -1.82
SCAPERQ9BY12 AL354710.1-201ENST00000453641 246 ntBASIC3.68□□□□□ -1.82
SCAPERQ9BY12 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC3.68□□□□□ -1.82
SCAPERQ9BY12 MTND4P2-201ENST00000507767 1203 ntBASIC3.68□□□□□ -1.82
SCAPERQ9BY12 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.68□□□□□ -1.82
SCAPERQ9BY12 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.68□□□□□ -1.82
SCAPERQ9BY12 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.68□□□□□ -1.82
SCAPERQ9BY12 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.68□□□□□ -1.82
SCAPERQ9BY12 RNA5SP456-201ENST00000364002 114 ntBASIC3.67□□□□□ -1.82
SCAPERQ9BY12 EIF5P1-201ENST00000400019 1231 ntBASIC3.67□□□□□ -1.82
SCAPERQ9BY12 RNA5SP247-201ENST00000411181 105 ntBASIC3.67□□□□□ -1.82
SCAPERQ9BY12 MRPL50P4-201ENST00000446432 475 ntBASIC3.67□□□□□ -1.82
SCAPERQ9BY12 ATG10-AS1-201ENST00000504846 648 ntBASIC3.67□□□□□ -1.82
SCAPERQ9BY12 SNORA31.1-201ENST00000515993 133 ntBASIC3.67□□□□□ -1.82
SCAPERQ9BY12 RNU6-1334P-201ENST00000516032 105 ntBASIC3.67□□□□□ -1.82
SCAPERQ9BY12 SNORA31.5-201ENST00000516190 133 ntBASIC3.67□□□□□ -1.82
SCAPERQ9BY12 IGHV3-76-201ENST00000522465 295 ntBASIC3.67□□□□□ -1.82
SCAPERQ9BY12 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.67□□□□□ -1.82
SCAPERQ9BY12 MIR1291-201ENST00000627649 87 ntBASIC3.67□□□□□ -1.82
SCAPERQ9BY12 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.67□□□□□ -1.82
SCAPERQ9BY12 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.67□□□□□ -1.82
SCAPERQ9BY12 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SCAPERQ9BY12 AC092447.7-201ENST00000422212 1621 ntBASIC3.66□□□□□ -1.82
SCAPERQ9BY12 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.66□□□□□ -1.82
SCAPERQ9BY12 AL390023.1-201ENST00000428836 262 ntBASIC3.66□□□□□ -1.82
SCAPERQ9BY12 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.66□□□□□ -1.82
SCAPERQ9BY12 RNA5SP458-201ENST00000516188 119 ntBASIC3.66□□□□□ -1.82
SCAPERQ9BY12 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.66□□□□□ -1.82
SCAPERQ9BY12 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.66□□□□□ -1.82
SCAPERQ9BY12 AC068446.3-201ENST00000555285 382 ntBASIC3.66□□□□□ -1.82
SCAPERQ9BY12 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.66□□□□□ -1.82
SCAPERQ9BY12 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.66□□□□□ -1.82
SCAPERQ9BY12 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SCAPERQ9BY12 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SCAPERQ9BY12 MIR6733-201ENST00000635723 61 ntBASIC3.66□□□□□ -1.82
SCAPERQ9BY12 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SCAPERQ9BY12 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SCAPERQ9BY12 HSPA8P4-201ENST00000511877 1920 ntBASIC3.66□□□□□ -1.82
SCAPERQ9BY12 AC069528.2-201ENST00000624849 1991 ntBASIC3.66□□□□□ -1.82
SCAPERQ9BY12 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SCAPERQ9BY12 RNU2-6P-201ENST00000411404 190 ntBASIC3.65□□□□□ -1.83
SCAPERQ9BY12 AC107081.1-201ENST00000414975 361 ntBASIC3.65□□□□□ -1.83
SCAPERQ9BY12 AL138785.1-201ENST00000425821 331 ntBASIC3.65□□□□□ -1.83
SCAPERQ9BY12 RN7SL297P-201ENST00000483161 293 ntBASIC3.65□□□□□ -1.83
SCAPERQ9BY12 RPL23AP49-201ENST00000492925 468 ntBASIC3.65□□□□□ -1.83
SCAPERQ9BY12 CKS1BP2-201ENST00000497342 240 ntBASIC3.65□□□□□ -1.83
SCAPERQ9BY12 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.65□□□□□ -1.83
SCAPERQ9BY12 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.65□□□□□ -1.83
SCAPERQ9BY12 CKS1BP7-201ENST00000522230 235 ntBASIC3.65□□□□□ -1.83
SCAPERQ9BY12 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.65□□□□□ -1.83
SCAPERQ9BY12 AC026464.5-201ENST00000562497 722 ntBASIC3.65□□□□□ -1.83
SCAPERQ9BY12 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.65□□□□□ -1.83
SCAPERQ9BY12 NRBF2P1-201ENST00000587407 859 ntBASIC3.65□□□□□ -1.83
SCAPERQ9BY12 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.65□□□□□ -1.83
SCAPERQ9BY12 AC092184.1-201ENST00000625042 715 ntBASIC3.65□□□□□ -1.83
SCAPERQ9BY12 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
SCAPERQ9BY12 MTND5P7-201ENST00000413558 1798 ntBASIC3.64□□□□□ -1.83
SCAPERQ9BY12 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
SCAPERQ9BY12 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SCAPERQ9BY12 RNA5SP129-201ENST00000410276 118 ntBASIC3.64□□□□□ -1.83
SCAPERQ9BY12 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
SCAPERQ9BY12 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.64□□□□□ -1.83
SCAPERQ9BY12 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.64□□□□□ -1.83
SCAPERQ9BY12 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.64□□□□□ -1.83
SCAPERQ9BY12 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.64□□□□□ -1.83
SCAPERQ9BY12 AC104389.3-201ENST00000445629 235 ntBASIC3.64□□□□□ -1.83
SCAPERQ9BY12 TRBV1-201ENST00000476502 284 ntBASIC3.64□□□□□ -1.83
SCAPERQ9BY12 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.64□□□□□ -1.83
SCAPERQ9BY12 OR4T1P-201ENST00000554933 911 ntBASIC3.64□□□□□ -1.83
SCAPERQ9BY12 AC107871.2-201ENST00000612894 502 ntBASIC3.64□□□□□ -1.83
SCAPERQ9BY12 VN1R9P-201ENST00000614184 867 ntBASIC3.64□□□□□ -1.83
SCAPERQ9BY12 CRYM-AS1-204ENST00000637983 556 ntBASIC3.64□□□□□ -1.83
SCAPERQ9BY12 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SCAPERQ9BY12 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SCAPERQ9BY12 MTCO1P14-201ENST00000441695 1559 ntBASIC3.64□□□□□ -1.83
SCAPERQ9BY12 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.63□□□□□ -1.83
SCAPERQ9BY12 RPL7P5-201ENST00000471472 736 ntBASIC3.63□□□□□ -1.83
SCAPERQ9BY12 AC126182.1-201ENST00000478134 357 ntBASIC3.63□□□□□ -1.83
SCAPERQ9BY12 AC026436.1-201ENST00000510537 270 ntBASIC3.63□□□□□ -1.83
SCAPERQ9BY12 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.63□□□□□ -1.83
SCAPERQ9BY12 AADACP1-206ENST00000561502 1193 ntBASIC3.63□□□□□ -1.83
SCAPERQ9BY12 AC022884.3-201ENST00000579571 248 ntBASIC3.63□□□□□ -1.83
SCAPERQ9BY12 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SCAPERQ9BY12 AC091564.4-201ENST00000533934 2194 ntBASIC3.63□□□□□ -1.83
SCAPERQ9BY12 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SCAPERQ9BY12 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.63□□□□□ -1.83
SCAPERQ9BY12 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SCAPERQ9BY12 SYT14P1-202ENST00000600441 1448 ntBASIC3.63□□□□□ -1.83
SCAPERQ9BY12 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SCAPERQ9BY12 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SCAPERQ9BY12 RNA5SP210-201ENST00000391034 120 ntBASIC3.62□□□□□ -1.83
SCAPERQ9BY12 SNORD88.1-201ENST00000408684 91 ntBASIC3.62□□□□□ -1.83
SCAPERQ9BY12 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms