Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL25A1Q9BXS0 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL25A1Q9BXS0 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL25A1Q9BXS0 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 TSHZ2-201ENST00000329613 3093 ntTSL 4 BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 AC011369.2-201ENST00000624423 1567 ntBASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 MIR411-201ENST00000362239 96 ntBASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 RNU6-611P-201ENST00000384276 104 ntBASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 RNU6-1127P-201ENST00000384580 107 ntBASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 RNU6-1154P-201ENST00000391001 104 ntBASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 AL590290.1-201ENST00000405336 380 ntBASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 GPS2P1-201ENST00000411761 986 ntBASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 RPS21P8-201ENST00000413365 247 ntBASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 UBE2D3P2-201ENST00000424409 445 ntBASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 RPL23AP74-201ENST00000437246 471 ntBASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 AC098869.1-201ENST00000481627 292 ntBASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 AC026801.1-201ENST00000497178 464 ntBASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 TBCAP3-201ENST00000512475 312 ntBASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 RNU6-202P-201ENST00000515998 96 ntBASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 RNU6-941P-201ENST00000516346 108 ntBASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 AC008033.2-201ENST00000542626 177 ntBASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 AC024619.4-201ENST00000580924 316 ntBASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 AC060771.1-201ENST00000582031 164 ntBASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 AC134882.1-201ENST00000603738 1676 ntBASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL25A1Q9BXS0 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 AL391684.1-202ENST00000641293 1636 ntBASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 PARP4P1-201ENST00000435945 2337 ntBASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 RNU6-1287P-201ENST00000362914 107 ntBASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 RNU6-511P-201ENST00000363496 107 ntBASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 RFX3-203ENST00000381984 364 ntTSL 3 BASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 RNU6-1060P-201ENST00000384664 107 ntBASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 Y_RNA.576-201ENST00000384781 102 ntBASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 AL138885.1-201ENST00000405921 675 ntBASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 ERMN-202ENST00000409216 746 ntTSL 4 BASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 RNU6-1156P-201ENST00000410365 100 ntBASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 RPL23AP4-201ENST00000427757 463 ntBASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 AL158071.1-201ENST00000430315 461 ntBASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 AC010881.1-201ENST00000433830 235 ntBASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 RPL23AP83-201ENST00000434984 473 ntBASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 AC020893.1-201ENST00000502452 580 ntBASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 RFPL4AP3-201ENST00000515267 345 ntBASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 IGKV2-38-201ENST00000517443 247 ntBASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 MIR4277-201ENST00000578298 84 ntBASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 AC008687.2-201ENST00000597865 520 ntBASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 AL355877.2-201ENST00000603670 358 ntBASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL25A1Q9BXS0 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 AC005839.1-201ENST00000624148 3213 ntBASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 CAST-202ENST00000325674 3356 ntTSL 5 BASIC5.8□□□□□ -1.48
COL25A1Q9BXS0 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms