Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC016597.2-201ENST00000613256 341 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 AL354976.1-201ENST00000613843 387 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 SNORD39.4-201ENST00000620099 78 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 AC073476.4-201ENST00000628409 72 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 MIR4278-201ENST00000636094 69 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 MKKS-204ENST00000639674 192 ntBASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.77□□□□□ -1.97
HDHD3Q9BSH5 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 SNORA5A-201ENST00000384111 134 ntBASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 SNORA51.6-201ENST00000384151 125 ntBASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 SSXP10-201ENST00000402595 565 ntBASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 AL450338.1-201ENST00000407987 512 ntBASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 RNA5SP56-201ENST00000410277 118 ntBASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 RNA5SP229-201ENST00000410809 99 ntBASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 RN7SKP263-201ENST00000411194 309 ntBASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 AL356320.2-201ENST00000417263 507 ntBASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 AC012065.2-201ENST00000421295 375 ntBASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 PSMA2P3-201ENST00000429685 675 ntBASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 SEPT7P5-201ENST00000434048 306 ntBASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 CKS1BP5-201ENST00000434172 273 ntBASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 AC103987.1-201ENST00000473394 348 ntBASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 RPL23AP44-201ENST00000482216 473 ntBASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 RPL21P131-201ENST00000497298 483 ntBASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 FCF1P8-201ENST00000510322 597 ntBASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 RNU1-95P-201ENST00000516357 160 ntBASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 RNU1-128P-201ENST00000516704 160 ntBASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 HIGD1AP10-201ENST00000527837 282 ntBASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 HIGD1AP5-201ENST00000529959 259 ntBASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 MIR3160-1-201ENST00000577972 85 ntBASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 HMGN2P28-201ENST00000606102 262 ntBASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 AL356321.1-201ENST00000621360 228 ntBASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 AC091903.1-201ENST00000624322 454 ntBASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
HDHD3Q9BSH5 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AL356274.2-201ENST00000624379 3752 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 RNU6-492P-201ENST00000363035 104 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 RNU1-85P-201ENST00000364127 164 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 RNU6-339P-201ENST00000384310 107 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 PTMAP5-201ENST00000393073 333 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 ARF4P3-201ENST00000397387 509 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 Y_RNA.625-201ENST00000411256 107 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 CYCSP19-201ENST00000411715 316 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AL133384.1-201ENST00000412744 351 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AC007899.1-201ENST00000412776 775 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AL161449.1-201ENST00000414531 1199 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 HMGB3P23-201ENST00000414981 585 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 SYF2P2-201ENST00000417620 583 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 FNDC3CP-201ENST00000420795 1155 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 RPL23AP16-201ENST00000441715 421 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 Z99127.3-201ENST00000448158 395 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AL589880.1-201ENST00000448271 287 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AL034418.1-201ENST00000448675 860 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 RPL26P28-201ENST00000451325 435 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 RFC5P1-201ENST00000454419 874 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 RPL7P38-201ENST00000488396 739 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 KLRA1P-201ENST00000503499 986 ntBASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.75□□□□□ -1.97
HDHD3Q9BSH5 AC113347.3-201ENST00000509113 148 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms