Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 VN1R104P-201ENST00000505115 1009 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 AC022447.3-201ENST00000506865 495 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 AC017037.1-201ENST00000508460 471 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 SNORA31.8-201ENST00000516327 108 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 AC063950.1-201ENST00000552036 308 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 RPL23AP87-202ENST00000573039 466 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 AC136624.4-201ENST00000573044 370 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 AC090616.2-202ENST00000584248 222 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 AC103710.4-201ENST00000609301 899 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 AL360219.1-201ENST00000610230 366 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 MLECP1-201ENST00000615893 709 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 AP003485.2-201ENST00000623636 610 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 AC095031.1-201ENST00000623685 672 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 AC099063.3-201ENST00000642066 185 ntBASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HERPUD2Q9BSE4 AL672296.1-201ENST00000427780 2158 ntBASIC4.34□□□□□ -1.72
HERPUD2Q9BSE4 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.34□□□□□ -1.72
HERPUD2Q9BSE4 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
HERPUD2Q9BSE4 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
HERPUD2Q9BSE4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 MTND4P26-201ENST00000415971 1359 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 MIR448-201ENST00000362131 111 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AC068538.1-201ENST00000376856 336 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AC107081.1-201ENST00000414975 361 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 RPL23AP39-201ENST00000415533 405 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 SSXP9-201ENST00000417503 292 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AL132765.1-201ENST00000434165 553 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AL590103.1-201ENST00000434488 307 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AC112653.1-201ENST00000443851 386 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AP000542.1-201ENST00000448473 371 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AC010655.1-201ENST00000449336 292 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AL133217.1-201ENST00000450980 425 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 HMGN2P7-201ENST00000456186 273 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 RNU7-125P-201ENST00000458760 62 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 RPL7P9-201ENST00000468715 747 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AC041039.1-201ENST00000485656 536 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AF213884.1-201ENST00000488102 463 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 RPL7P23-201ENST00000493874 747 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AC139783.2-201ENST00000504847 1145 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 IGKV2D-23-201ENST00000518179 286 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AP004247.1-201ENST00000531556 1289 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AC013828.2-201ENST00000532487 235 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 PARP1P2-201ENST00000556806 195 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 BNIP3P5-201ENST00000562290 498 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 ZNF192P1-203ENST00000565888 810 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AC012435.1-202ENST00000568772 240 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AC023575.1-201ENST00000580510 358 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AC022916.3-201ENST00000592961 742 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AC106028.5-201ENST00000610332 395 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 MIR6716-201ENST00000613413 80 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AC026368.1-201ENST00000614934 690 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AC010608.2-201ENST00000624830 470 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 AF127577.6-201ENST00000623352 2191 ntBASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HERPUD2Q9BSE4 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HERPUD2Q9BSE4 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.32□□□□□ -1.72
HERPUD2Q9BSE4 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.32□□□□□ -1.72
HERPUD2Q9BSE4 MTND4P16-201ENST00000466108 1367 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms