Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC104090.1-201ENST00000506341 1171 ntBASIC3.19□□□□□ -1.9
ABCA3Q99758 AC068446.3-201ENST00000555285 382 ntBASIC3.19□□□□□ -1.9
ABCA3Q99758 AL353997.5-201ENST00000618886 171 ntBASIC3.19□□□□□ -1.9
ABCA3Q99758 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.18□□□□□ -1.9
ABCA3Q99758 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.18□□□□□ -1.9
ABCA3Q99758 AC022336.2-201ENST00000568966 2538 ntBASIC3.18□□□□□ -1.9
ABCA3Q99758 ZNF542P-204ENST00000482727 1305 ntBASIC3.18□□□□□ -1.9
ABCA3Q99758 CUL1P1-201ENST00000509510 2425 ntBASIC3.18□□□□□ -1.9
ABCA3Q99758 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.18□□□□□ -1.9
ABCA3Q99758 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
ABCA3Q99758 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.18□□□□□ -1.9
ABCA3Q99758 RANP7-201ENST00000418085 644 ntBASIC3.18□□□□□ -1.9
ABCA3Q99758 ATG3P1-201ENST00000419507 911 ntBASIC3.18□□□□□ -1.9
ABCA3Q99758 AL034379.1-201ENST00000423216 253 ntBASIC3.18□□□□□ -1.9
ABCA3Q99758 SEC63P1-201ENST00000425785 1258 ntBASIC3.18□□□□□ -1.9
ABCA3Q99758 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.18□□□□□ -1.9
ABCA3Q99758 RN7SL499P-201ENST00000481141 276 ntBASIC3.18□□□□□ -1.9
ABCA3Q99758 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.18□□□□□ -1.9
ABCA3Q99758 KCTD9P5-201ENST00000504141 1170 ntBASIC3.18□□□□□ -1.9
ABCA3Q99758 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.18□□□□□ -1.9
ABCA3Q99758 HIGD1AP10-201ENST00000527837 282 ntBASIC3.18□□□□□ -1.9
ABCA3Q99758 OR4A45P-201ENST00000529954 901 ntBASIC3.18□□□□□ -1.9
ABCA3Q99758 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.18□□□□□ -1.9
ABCA3Q99758 CD24P2-201ENST00000565486 219 ntBASIC3.18□□□□□ -1.9
ABCA3Q99758 MIR4498-201ENST00000577599 66 ntBASIC3.18□□□□□ -1.9
ABCA3Q99758 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.18□□□□□ -1.9
ABCA3Q99758 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.18□□□□□ -1.9
ABCA3Q99758 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.18□□□□□ -1.9
ABCA3Q99758 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.18□□□□□ -1.9
ABCA3Q99758 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
ABCA3Q99758 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC3.17□□□□□ -1.9
ABCA3Q99758 RNU6-1159P-201ENST00000362933 107 ntBASIC3.17□□□□□ -1.9
ABCA3Q99758 Y_RNA.140-201ENST00000363474 103 ntBASIC3.17□□□□□ -1.9
ABCA3Q99758 AC018634.1-201ENST00000437554 401 ntBASIC3.17□□□□□ -1.9
ABCA3Q99758 AC026436.1-201ENST00000510537 270 ntBASIC3.17□□□□□ -1.9
ABCA3Q99758 AC107222.1-201ENST00000510899 637 ntBASIC3.17□□□□□ -1.9
ABCA3Q99758 AC112673.1-201ENST00000513168 575 ntBASIC3.17□□□□□ -1.9
ABCA3Q99758 RNA5SP380-201ENST00000517190 98 ntBASIC3.17□□□□□ -1.9
ABCA3Q99758 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
ABCA3Q99758 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
ABCA3Q99758 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
ABCA3Q99758 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.17□□□□□ -1.9
ABCA3Q99758 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.17□□□□□ -1.9
ABCA3Q99758 AC061975.8-201ENST00000587058 721 ntBASIC3.17□□□□□ -1.9
ABCA3Q99758 AC000123.2-201ENST00000623124 461 ntBASIC3.17□□□□□ -1.9
ABCA3Q99758 AC132825.8-201ENST00000640783 297 ntBASIC3.17□□□□□ -1.9
ABCA3Q99758 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
ABCA3Q99758 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.16□□□□□ -1.9
ABCA3Q99758 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ABCA3Q99758 SNORA64-201ENST00000384674 134 ntBASIC3.16□□□□□ -1.9
ABCA3Q99758 SNORA80E-201ENST00000384744 137 ntBASIC3.16□□□□□ -1.9
ABCA3Q99758 SNORA17.3-201ENST00000391159 129 ntBASIC3.16□□□□□ -1.9
ABCA3Q99758 AL356806.1-201ENST00000422524 916 ntBASIC3.16□□□□□ -1.9
ABCA3Q99758 RN7SKP210-201ENST00000459176 261 ntBASIC3.16□□□□□ -1.9
ABCA3Q99758 AP000893.1-201ENST00000474462 794 ntBASIC3.16□□□□□ -1.9
ABCA3Q99758 RPL23AP49-201ENST00000492925 468 ntBASIC3.16□□□□□ -1.9
ABCA3Q99758 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ABCA3Q99758 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
ABCA3Q99758 Z99496.1-201ENST00000469424 1477 ntBASIC3.16□□□□□ -1.9
ABCA3Q99758 NSRP1P1-201ENST00000444067 1693 ntBASIC3.16□□□□□ -1.9
ABCA3Q99758 MTND5P19-201ENST00000424872 1794 ntBASIC3.16□□□□□ -1.9
ABCA3Q99758 AL136964.1-201ENST00000622038 2990 ntBASIC3.16□□□□□ -1.9
ABCA3Q99758 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ABCA3Q99758 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ABCA3Q99758 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.16□□□□□ -1.9
ABCA3Q99758 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ABCA3Q99758 U8.13-201ENST00000390842 128 ntBASIC3.16□□□□□ -1.9
ABCA3Q99758 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ABCA3Q99758 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.16□□□□□ -1.9
ABCA3Q99758 CFTRP1-201ENST00000456646 183 ntBASIC3.16□□□□□ -1.9
ABCA3Q99758 FAM92A1P2-202ENST00000504766 877 ntBASIC3.16□□□□□ -1.9
ABCA3Q99758 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.16□□□□□ -1.9
ABCA3Q99758 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.16□□□□□ -1.9
ABCA3Q99758 CR589904.2-201ENST00000612533 440 ntBASIC3.16□□□□□ -1.9
ABCA3Q99758 GTF2H2B-203ENST00000508065 1432 ntBASIC3.15□□□□□ -1.9
ABCA3Q99758 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
ABCA3Q99758 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.15□□□□□ -1.91
ABCA3Q99758 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.15□□□□□ -1.91
ABCA3Q99758 AL023284.1-201ENST00000403956 276 ntBASIC3.15□□□□□ -1.91
ABCA3Q99758 RPS20P25-201ENST00000412447 352 ntBASIC3.15□□□□□ -1.91
ABCA3Q99758 AP000857.1-201ENST00000532151 543 ntBASIC3.15□□□□□ -1.91
ABCA3Q99758 NPM1P35-201ENST00000533043 868 ntBASIC3.15□□□□□ -1.91
ABCA3Q99758 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.15□□□□□ -1.91
ABCA3Q99758 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
ABCA3Q99758 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
ABCA3Q99758 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
ABCA3Q99758 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.14□□□□□ -1.91
ABCA3Q99758 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ABCA3Q99758 RNU6-328P-201ENST00000390887 106 ntBASIC3.14□□□□□ -1.91
ABCA3Q99758 AL590004.2-201ENST00000404787 371 ntBASIC3.14□□□□□ -1.91
ABCA3Q99758 FAT1P1-201ENST00000406588 507 ntBASIC3.14□□□□□ -1.91
ABCA3Q99758 RN7SKP32-201ENST00000410167 303 ntBASIC3.14□□□□□ -1.91
ABCA3Q99758 AC011816.1-201ENST00000441346 546 ntBASIC3.14□□□□□ -1.91
ABCA3Q99758 AC021146.5-201ENST00000503544 545 ntBASIC3.14□□□□□ -1.91
ABCA3Q99758 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.14□□□□□ -1.91
ABCA3Q99758 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.14□□□□□ -1.91
ABCA3Q99758 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.14□□□□□ -1.91
ABCA3Q99758 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.14□□□□□ -1.91
ABCA3Q99758 AL845331.3-202ENST00000562856 261 ntBASIC3.14□□□□□ -1.91
ABCA3Q99758 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms