Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AL589994.2-201ENST00000621124 579 ntBASIC2.01□□□□□ -2.09
CSMD1Q96PZ7 AC010338.1-201ENST00000621823 717 ntBASIC2.01□□□□□ -2.09
CSMD1Q96PZ7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CSMD1Q96PZ7 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC2.01□□□□□ -2.09
CSMD1Q96PZ7 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC2.01□□□□□ -2.09
CSMD1Q96PZ7 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CSMD1Q96PZ7 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
CSMD1Q96PZ7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.01□□□□□ -2.09
CSMD1Q96PZ7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CSMD1Q96PZ7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CSMD1Q96PZ7 HMGB1P10-201ENST00000395823 563 ntBASIC2□□□□□ -2.09
CSMD1Q96PZ7 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2□□□□□ -2.09
CSMD1Q96PZ7 AC026436.1-201ENST00000510537 270 ntBASIC2□□□□□ -2.09
CSMD1Q96PZ7 AL355836.1-201ENST00000555951 870 ntBASIC2□□□□□ -2.09
CSMD1Q96PZ7 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2□□□□□ -2.09
CSMD1Q96PZ7 AP001542.2-201ENST00000593141 364 ntBASIC2□□□□□ -2.09
CSMD1Q96PZ7 AC004925.1-201ENST00000624256 2706 ntBASIC2□□□□□ -2.09
CSMD1Q96PZ7 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC2□□□□□ -2.09
CSMD1Q96PZ7 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC2□□□□□ -2.09
CSMD1Q96PZ7 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2□□□□□ -2.09
CSMD1Q96PZ7 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
CSMD1Q96PZ7 LUZP4P1-201ENST00000415420 344 ntBASIC2□□□□□ -2.09
CSMD1Q96PZ7 CR769767.1-201ENST00000436337 346 ntBASIC2□□□□□ -2.09
CSMD1Q96PZ7 AC009238.1-201ENST00000442165 424 ntBASIC2□□□□□ -2.09
CSMD1Q96PZ7 AC009237.6-201ENST00000446969 424 ntBASIC2□□□□□ -2.09
CSMD1Q96PZ7 AC007395.1-201ENST00000451333 677 ntBASIC2□□□□□ -2.09
CSMD1Q96PZ7 KCTD9P5-201ENST00000504141 1170 ntBASIC2□□□□□ -2.09
CSMD1Q96PZ7 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2□□□□□ -2.09
CSMD1Q96PZ7 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2□□□□□ -2.09
CSMD1Q96PZ7 IGLVIV-53-201ENST00000520107 367 ntBASIC2□□□□□ -2.09
CSMD1Q96PZ7 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2□□□□□ -2.09
CSMD1Q96PZ7 AC004520.1-201ENST00000608362 1413 ntBASIC2□□□□□ -2.09
CSMD1Q96PZ7 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC2□□□□□ -2.09
CSMD1Q96PZ7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
CSMD1Q96PZ7 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2□□□□□ -2.09
CSMD1Q96PZ7 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CSMD1Q96PZ7 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2□□□□□ -2.09
CSMD1Q96PZ7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2□□□□□ -2.09
CSMD1Q96PZ7 RNA5SP274-201ENST00000410484 108 ntBASIC2□□□□□ -2.09
CSMD1Q96PZ7 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2□□□□□ -2.09
CSMD1Q96PZ7 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC2□□□□□ -2.09
CSMD1Q96PZ7 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2□□□□□ -2.09
CSMD1Q96PZ7 AC108078.2-201ENST00000510750 236 ntBASIC2□□□□□ -2.09
CSMD1Q96PZ7 ELOCP31-201ENST00000540463 467 ntBASIC2□□□□□ -2.09
CSMD1Q96PZ7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
CSMD1Q96PZ7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 AC083843.2-201ENST00000568248 6253 ntBASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 MTCO1P22-201ENST00000604619 1360 ntBASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 AL606490.7-201ENST00000433136 191 ntBASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 RPL23AP74-201ENST00000437246 471 ntBASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 AL592437.1-201ENST00000443781 492 ntBASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 MRPL50P4-201ENST00000446432 475 ntBASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 RPS29P11-201ENST00000496507 171 ntBASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 AC128657.1-201ENST00000549459 145 ntBASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 AC004825.2-201ENST00000616634 455 ntBASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 USP9YP20-201ENST00000419224 558 ntBASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 AC103975.1-201ENST00000482506 483 ntBASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 AC021146.8-201ENST00000507455 733 ntBASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 HSPE1P18-201ENST00000517602 280 ntBASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 AC122134.1-201ENST00000565664 1104 ntBASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 YWHAEP7-203ENST00000622054 312 ntBASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 AC005840.1-201ENST00000498412 377 ntBASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 VN1R80P-201ENST00000597126 338 ntBASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 AC110994.2-201ENST00000635481 492 ntBASIC1.99□□□□□ -2.09
CSMD1Q96PZ7 RNY1-201ENST00000364228 113 ntBASIC1.98□□□□□ -2.09
CSMD1Q96PZ7 AL355379.1-201ENST00000405542 640 ntBASIC1.98□□□□□ -2.09
CSMD1Q96PZ7 RPS15AP28-201ENST00000435088 386 ntBASIC1.98□□□□□ -2.09
CSMD1Q96PZ7 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
CSMD1Q96PZ7 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC1.98□□□□□ -2.09
CSMD1Q96PZ7 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.98□□□□□ -2.09
CSMD1Q96PZ7 THUMPD3P1-201ENST00000506556 1480 ntBASIC1.98□□□□□ -2.09
CSMD1Q96PZ7 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CSMD1Q96PZ7 AC072039.1-201ENST00000477611 581 ntBASIC1.98□□□□□ -2.09
CSMD1Q96PZ7 VWA8P1-201ENST00000510889 176 ntBASIC1.98□□□□□ -2.09
CSMD1Q96PZ7 RNA5SP490-201ENST00000517141 136 ntBASIC1.98□□□□□ -2.09
CSMD1Q96PZ7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CSMD1Q96PZ7 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC1.98□□□□□ -2.09
CSMD1Q96PZ7 SAGE4P-201ENST00000442271 3381 ntBASIC1.98□□□□□ -2.09
CSMD1Q96PZ7 MIR137-201ENST00000385223 102 ntBASIC1.98□□□□□ -2.09
CSMD1Q96PZ7 OFD1P1Y-201ENST00000411756 1225 ntBASIC1.98□□□□□ -2.09
CSMD1Q96PZ7 AL034379.1-201ENST00000423216 253 ntBASIC1.98□□□□□ -2.09
CSMD1Q96PZ7 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC1.98□□□□□ -2.09
CSMD1Q96PZ7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC1.98□□□□□ -2.09
CSMD1Q96PZ7 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC1.98□□□□□ -2.09
CSMD1Q96PZ7 SNRPGP18-201ENST00000553000 214 ntBASIC1.98□□□□□ -2.09
CSMD1Q96PZ7 AC011492.1-201ENST00000600023 315 ntBASIC1.98□□□□□ -2.09
CSMD1Q96PZ7 CR589904.2-201ENST00000612533 440 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms