Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 NRBF2P5-201ENST00000603087 788 ntBASIC4□□□□□ -1.77
ZNF48Q96MX3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4□□□□□ -1.77
ZNF48Q96MX3 AC099669.2-201ENST00000616549 437 ntBASIC4□□□□□ -1.77
ZNF48Q96MX3 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4□□□□□ -1.77
ZNF48Q96MX3 AL731566.2-201ENST00000618971 317 ntBASIC4□□□□□ -1.77
ZNF48Q96MX3 AC090574.1-201ENST00000623186 233 ntBASIC4□□□□□ -1.77
ZNF48Q96MX3 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4□□□□□ -1.77
ZNF48Q96MX3 PISRT1-201ENST00000626175 531 ntBASIC4□□□□□ -1.77
ZNF48Q96MX3 AC026634.1-201ENST00000634369 198 ntBASIC4□□□□□ -1.77
ZNF48Q96MX3 AC110994.2-201ENST00000635481 492 ntBASIC4□□□□□ -1.77
ZNF48Q96MX3 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4□□□□□ -1.77
ZNF48Q96MX3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
ZNF48Q96MX3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
ZNF48Q96MX3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4□□□□□ -1.77
ZNF48Q96MX3 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
ZNF48Q96MX3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
ZNF48Q96MX3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ZNF48Q96MX3 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4□□□□□ -1.77
ZNF48Q96MX3 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
ZNF48Q96MX3 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
ZNF48Q96MX3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
ZNF48Q96MX3 AL139811.1-201ENST00000424779 2299 ntBASIC4□□□□□ -1.77
ZNF48Q96MX3 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4□□□□□ -1.77
ZNF48Q96MX3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AC006378.2-201ENST00000623178 2476 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 OR4G11P-202ENST00000642116 1414 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 RNY4P34-201ENST00000364779 95 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 RNU6-878P-201ENST00000384578 110 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 MIR3074-201ENST00000384885 81 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 RNU6-332P-201ENST00000391193 108 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 RN7SKP177-201ENST00000410567 355 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AC016712.1-201ENST00000431088 378 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 FCF1P1-201ENST00000432690 571 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AC002486.1-201ENST00000435098 391 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 RPS26P40-201ENST00000435209 294 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 NDUFA5P4-201ENST00000436704 385 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 SDCBPP1-201ENST00000440192 890 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 RPL7AP61-201ENST00000443410 636 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 BTF3P6-201ENST00000448054 499 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 OR1H1P-201ENST00000448731 937 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AURKAPS2-201ENST00000454983 333 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 C1DP4-201ENST00000455429 424 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 NF1P3-201ENST00000457709 450 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 RPL23AP56-201ENST00000460778 453 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 RPL39P36-201ENST00000490784 156 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AC011005.3-201ENST00000491624 395 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AC093809.1-201ENST00000509155 340 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 FGF7P4-201ENST00000509595 295 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AC010493.1-201ENST00000513479 292 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 RNA5SP392-201ENST00000516905 112 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AP003467.2-201ENST00000520175 319 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AP003122.4-201ENST00000530980 758 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AC007424.1-203ENST00000554613 687 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 MIR4697-201ENST00000582977 78 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AC010928.3-201ENST00000587712 541 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AP001429.1-201ENST00000602568 530 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 BNIP3P10-201ENST00000605360 577 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AL162730.1-201ENST00000605734 292 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AC113194.1-201ENST00000606037 500 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AL050343.2-201ENST00000607338 280 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 Y_RNA.812-201ENST00000610788 101 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 Y_RNA.784-201ENST00000613803 101 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 Y_RNA.787-201ENST00000616522 101 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 Y_RNA.780-201ENST00000617336 101 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AC015914.2-201ENST00000618167 288 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 Y_RNA.801-201ENST00000619005 101 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 YWHAEP7-203ENST00000622054 312 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AC231657.1-201ENST00000624313 397 ntBASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
ZNF48Q96MX3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
ZNF48Q96MX3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 154 ms