Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LINC00479Q96M42 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC00479Q96M42 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LINC00479Q96M42 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC00479Q96M42 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC00479Q96M42 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LINC00479Q96M42 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 RNU6-1283P-201ENST00000365314 105 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 RNU1-89P-201ENST00000384592 164 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 AL133270.1-201ENST00000402635 279 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 HMGB1P17-201ENST00000403495 628 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 RPL31P52-201ENST00000407532 367 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LINC00479Q96M42 USP9YP13-201ENST00000417797 480 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 AL513174.1-201ENST00000423182 629 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 RPL7AP25-201ENST00000423357 805 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 MTCYBP5-201ENST00000423752 1135 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 AL356535.1-201ENST00000440335 398 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 PGBD4P3-201ENST00000440731 581 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 MTND1P1-201ENST00000445453 368 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 AC002381.1-201ENST00000447049 280 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 PDSS1P2-201ENST00000449397 678 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 AC104073.1-201ENST00000451988 151 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 RAD23BP3-201ENST00000454157 1152 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 AC091685.2-201ENST00000454924 864 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 DHFRP3-201ENST00000455595 559 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 AC053481.1-201ENST00000467217 306 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 AC087879.1-201ENST00000474343 374 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC00479Q96M42 RPL12P20-201ENST00000475538 479 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LINC00479Q96M42 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 RPL31P61-201ENST00000496160 376 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 AC021678.1-201ENST00000505195 936 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 AC109464.2-201ENST00000510242 943 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 PAICSP4-201ENST00000517543 1253 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 MTND4LP18-201ENST00000526864 291 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 ZNF705CP-201ENST00000530515 889 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LINC00479Q96M42 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 AC008127.2-201ENST00000549925 1075 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 CBX3P5-201ENST00000552017 521 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 TPRKBP2-201ENST00000565969 475 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 UBE2FP2-201ENST00000566646 462 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 AC009977.1-201ENST00000586015 570 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 AC091965.4-201ENST00000607691 587 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 AC133644.2-201ENST00000608142 540 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 AL773545.4-201ENST00000637262 310 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 AL513478.4-201ENST00000641636 310 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 AC006378.2-201ENST00000623178 2476 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC00479Q96M42 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.19□□□□□ -1.9
LINC00479Q96M42 DCAF13P1-201ENST00000495256 1330 ntBASIC3.19□□□□□ -1.9
LINC00479Q96M42 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00479Q96M42 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00479Q96M42 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00479Q96M42 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00479Q96M42 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00479Q96M42 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 MIR331-201ENST00000362302 94 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 RN7SKP44-201ENST00000363602 316 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 RNU6-1243P-201ENST00000364028 107 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00479Q96M42 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LINC00479Q96M42 RNU6-533P-201ENST00000384144 107 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
LINC00479Q96M42 RNA5SP397-201ENST00000391323 118 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 RPS3AP36-201ENST00000398190 775 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 AL023807.1-201ENST00000407932 359 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 Y_RNA.598-201ENST00000410480 95 ntBASIC3.18□□□□□ -1.9
LINC00479Q96M42 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms