Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 PRELID3BP4-201ENST00000515476 571 ntBASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 RNA5SP471-201ENST00000516971 106 ntBASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 CDH12P4-201ENST00000517835 295 ntBASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 CDH12P3-201ENST00000517935 295 ntBASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 CDH12P1-201ENST00000518435 295 ntBASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 CR383656.6-201ENST00000550518 394 ntBASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 AL356280.1-201ENST00000603614 379 ntBASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 AC025588.4-201ENST00000615802 908 ntBASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 AC090617.9-201ENST00000623751 147 ntBASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 AC112484.5-201ENST00000624189 228 ntBASIC3.54□□□□□ -1.84
PKNOX2Q96KN3 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 AC004944.1-201ENST00000517807 3059 ntBASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 RNU1-105P-201ENST00000363470 161 ntBASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 MIR937-201ENST00000401271 86 ntBASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 RNU2-17P-201ENST00000410290 190 ntBASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 AC016769.2-201ENST00000414815 475 ntBASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 AL356968.1-201ENST00000416622 474 ntBASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 RPL23AP70-201ENST00000483361 460 ntBASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 OR5H5P-201ENST00000503164 928 ntBASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 SNORA31.11-201ENST00000516528 139 ntBASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 SNORA31.21-201ENST00000517180 77 ntBASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 AP000867.2-201ENST00000532468 320 ntBASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 AC087499.8-201ENST00000578406 226 ntBASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 AL356575.1-201ENST00000603008 283 ntBASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 AC004775.1-201ENST00000607389 753 ntBASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 MIR6820-201ENST00000611508 62 ntBASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 MIR492-201ENST00000638676 116 ntBASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.53□□□□□ -1.84
PKNOX2Q96KN3 AL513185.3-201ENST00000433335 1300 ntBASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 MIR585-201ENST00000384887 94 ntBASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 AL353692.2-201ENST00000407054 335 ntBASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 AL591419.1-201ENST00000427423 339 ntBASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 RPS15AP29-201ENST00000445539 400 ntBASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 AC092685.1-201ENST00000447960 1243 ntBASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 SNRPGP6-201ENST00000451124 220 ntBASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 MTND2P3-201ENST00000452458 470 ntBASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 RN7SL385P-201ENST00000468873 276 ntBASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 RPL7P19-201ENST00000469948 618 ntBASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 RNU6-488P-201ENST00000515918 99 ntBASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 AC026616.1-201ENST00000523157 525 ntBASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 CKS1BP1-201ENST00000555221 240 ntBASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 AC053481.3-201ENST00000577881 843 ntBASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 AC018618.2-201ENST00000604770 446 ntBASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 AL590392.1-201ENST00000604960 446 ntBASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 BX323046.1-201ENST00000610145 535 ntBASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 MLECP1-201ENST00000615893 709 ntBASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PKNOX2Q96KN3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.51□□□□□ -1.85
PKNOX2Q96KN3 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PKNOX2Q96KN3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
PKNOX2Q96KN3 RNU6-821P-201ENST00000390995 107 ntBASIC3.51□□□□□ -1.85
PKNOX2Q96KN3 RNA5SP354-201ENST00000391247 136 ntBASIC3.51□□□□□ -1.85
PKNOX2Q96KN3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.51□□□□□ -1.85
PKNOX2Q96KN3 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.51□□□□□ -1.85
PKNOX2Q96KN3 RPL7P37-201ENST00000425095 738 ntBASIC3.51□□□□□ -1.85
PKNOX2Q96KN3 YY1P1-201ENST00000427625 668 ntBASIC3.51□□□□□ -1.85
PKNOX2Q96KN3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms