Protein–RNA interactions for Protein: Q96EL3

MRPL53, 39S ribosomal protein L53, mitochondrial, humanhuman

Known RBP Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL53Q96EL3 RNU6-328P-201ENST00000390887 106 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 AL590704.1-201ENST00000402856 794 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 AL356421.1-201ENST00000403255 413 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 RN7SKP266-201ENST00000410232 287 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 RPS3AP25-201ENST00000411660 793 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 TPMTP3-201ENST00000411928 735 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 RPL7AP73-201ENST00000413490 353 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 HMGB3P23-201ENST00000414981 585 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 HIGD1AP15-201ENST00000416198 280 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 MTCO2P17-201ENST00000424336 677 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 MTATP6P4-201ENST00000427725 675 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 AC024082.2-201ENST00000434771 238 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 AF228730.2-201ENST00000438784 848 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 SSXP4-201ENST00000451349 245 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 VN1R40P-201ENST00000455196 941 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 RPL23AP24-201ENST00000458203 385 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 RPS27AP1-201ENST00000475545 471 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 RN7SL826P-201ENST00000479724 288 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 AC108860.1-201ENST00000484521 383 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 AC111000.3-201ENST00000508057 576 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 AC099522.1-202ENST00000514718 367 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 SETP2-201ENST00000553886 926 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 AC136618.2-201ENST00000575091 400 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 MIR5684-201ENST00000585074 65 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 BNIP3P38-201ENST00000601117 544 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 AC068790.5-201ENST00000602741 355 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 MIR486-1-201ENST00000612171 68 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 AL391261.4-201ENST00000616012 481 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 XIST_intron.1-201ENST00000619444 68 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 PLCE1P1-201ENST00000622094 305 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 U6.98-201ENST00000637157 84 ntBASIC3.08□□□□□ -1.92
MRPL53Q96EL3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.08□□□□□ -1.92
MRPL53Q96EL3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.07□□□□□ -1.92
MRPL53Q96EL3 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.07□□□□□ -1.92
MRPL53Q96EL3 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
MRPL53Q96EL3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.07□□□□□ -1.92
MRPL53Q96EL3 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.07□□□□□ -1.92
MRPL53Q96EL3 SNORD35B-201ENST00000363660 87 ntBASIC3.07□□□□□ -1.92
MRPL53Q96EL3 RNU6-744P-201ENST00000365557 107 ntBASIC3.07□□□□□ -1.92
MRPL53Q96EL3 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
MRPL53Q96EL3 RNU6-1316P-201ENST00000384242 108 ntBASIC3.07□□□□□ -1.92
MRPL53Q96EL3 RNU6-1207P-201ENST00000384343 107 ntBASIC3.07□□□□□ -1.92
MRPL53Q96EL3 RNU1-89P-201ENST00000384592 164 ntBASIC3.07□□□□□ -1.92
MRPL53Q96EL3 MIR320C1-201ENST00000408566 88 ntBASIC3.07□□□□□ -1.92
MRPL53Q96EL3 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.07□□□□□ -1.92
MRPL53Q96EL3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.07□□□□□ -1.92
MRPL53Q96EL3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.07□□□□□ -1.92
MRPL53Q96EL3 BTF3P10-201ENST00000433415 495 ntBASIC3.07□□□□□ -1.92
MRPL53Q96EL3 KCTD9P3-201ENST00000434597 1169 ntBASIC3.07□□□□□ -1.92
MRPL53Q96EL3 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.07□□□□□ -1.92
MRPL53Q96EL3 YWHAZP7-201ENST00000436906 631 ntBASIC3.07□□□□□ -1.92
MRPL53Q96EL3 AL138878.2-201ENST00000440581 1241 ntBASIC3.07□□□□□ -1.92
MRPL53Q96EL3 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.07□□□□□ -1.92
MRPL53Q96EL3 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
MRPL53Q96EL3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.07□□□□□ -1.92
MRPL53Q96EL3 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.07□□□□□ -1.92
MRPL53Q96EL3 RPL38P1-201ENST00000460914 211 ntBASIC3.07□□□□□ -1.92
MRPL53Q96EL3 RN7SL610P-201ENST00000463845 291 ntBASIC3.07□□□□□ -1.92
MRPL53Q96EL3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.07□□□□□ -1.92
MRPL53Q96EL3 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.07□□□□□ -1.92
MRPL53Q96EL3 AF213884.1-201ENST00000488102 463 ntBASIC3.07□□□□□ -1.92
MRPL53Q96EL3 AC147055.4-201ENST00000504399 745 ntBASIC3.07□□□□□ -1.92
MRPL53Q96EL3 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.07□□□□□ -1.92
MRPL53Q96EL3 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.07□□□□□ -1.92
MRPL53Q96EL3 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.07□□□□□ -1.92
MRPL53Q96EL3 MRPS36P3-201ENST00000519284 130 ntBASIC3.07□□□□□ -1.92
MRPL53Q96EL3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.07□□□□□ -1.92
MRPL53Q96EL3 TRAV8-5-201ENST00000537369 341 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms