Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.76□□□□□ -1.65
HPS3Q969F9 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.76□□□□□ -1.65
HPS3Q969F9 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.76□□□□□ -1.65
HPS3Q969F9 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.76□□□□□ -1.65
HPS3Q969F9 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.76□□□□□ -1.65
HPS3Q969F9 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.76□□□□□ -1.65
HPS3Q969F9 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.76□□□□□ -1.65
HPS3Q969F9 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.76□□□□□ -1.65
HPS3Q969F9 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.76□□□□□ -1.65
HPS3Q969F9 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HPS3Q969F9 BCRP9-201ENST00000605312 388 ntBASIC4.76□□□□□ -1.65
HPS3Q969F9 AC091965.4-201ENST00000607691 587 ntBASIC4.76□□□□□ -1.65
HPS3Q969F9 AC083809.1-201ENST00000615051 472 ntBASIC4.76□□□□□ -1.65
HPS3Q969F9 AC108479.2-201ENST00000617314 601 ntBASIC4.76□□□□□ -1.65
HPS3Q969F9 uc_338.13-201ENST00000618243 179 ntBASIC4.76□□□□□ -1.65
HPS3Q969F9 AL596245.1-201ENST00000618994 362 ntBASIC4.76□□□□□ -1.65
HPS3Q969F9 MIR7154-201ENST00000620673 73 ntBASIC4.76□□□□□ -1.65
HPS3Q969F9 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
HPS3Q969F9 AL049780.3-201ENST00000624612 1583 ntBASIC4.76□□□□□ -1.65
HPS3Q969F9 AC084035.1-201ENST00000634543 607 ntBASIC4.76□□□□□ -1.65
HPS3Q969F9 CRYM-AS1-204ENST00000637983 556 ntBASIC4.76□□□□□ -1.65
HPS3Q969F9 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HPS3Q969F9 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
HPS3Q969F9 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.75□□□□□ -1.65
HPS3Q969F9 AL158163.1-201ENST00000603915 1649 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HPS3Q969F9 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HPS3Q969F9 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
HPS3Q969F9 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.75□□□□□ -1.65
HPS3Q969F9 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HPS3Q969F9 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HPS3Q969F9 RNU6-853P-201ENST00000364306 107 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 Y_RNA.359-201ENST00000365498 102 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 RNU6-533P-201ENST00000384144 107 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 RNU6-1042P-201ENST00000384204 107 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 Y_RNA.493-201ENST00000384422 102 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 DEFB108C-201ENST00000400154 252 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 SNORA11F-201ENST00000408237 128 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 RNA5SP36-201ENST00000410197 133 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 RNU2-16P-201ENST00000410712 136 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.75□□□□□ -1.65
HPS3Q969F9 MTCYBP24-201ENST00000420387 1106 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.75□□□□□ -1.65
HPS3Q969F9 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.75□□□□□ -1.65
HPS3Q969F9 OR8F1P-201ENST00000425243 930 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 AL356583.2-201ENST00000426536 280 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.75□□□□□ -1.65
HPS3Q969F9 CKS1BP5-201ENST00000434172 273 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 ELOCP18-201ENST00000434209 337 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 MTND1P34-201ENST00000438556 671 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.75□□□□□ -1.65
HPS3Q969F9 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.75□□□□□ -1.65
HPS3Q969F9 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.75□□□□□ -1.65
HPS3Q969F9 PPIAP3-201ENST00000450588 505 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 BTF3P5-201ENST00000457252 467 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 RPL7AP28-201ENST00000464513 571 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 RPS4XP10-201ENST00000465034 731 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 RPS26P28-201ENST00000470806 348 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 RN7SL812P-201ENST00000493791 279 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 AC104164.2-201ENST00000496953 495 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.75□□□□□ -1.65
HPS3Q969F9 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.75□□□□□ -1.65
HPS3Q969F9 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.75□□□□□ -1.65
HPS3Q969F9 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HPS3Q969F9 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.75□□□□□ -1.65
HPS3Q969F9 PHBP17-201ENST00000528576 541 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 AP002748.2-201ENST00000528671 348 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.75□□□□□ -1.65
HPS3Q969F9 AL109766.1-201ENST00000555080 552 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.75□□□□□ -1.65
HPS3Q969F9 MIR5697-201ENST00000578045 78 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.75□□□□□ -1.65
HPS3Q969F9 AC087683.1-201ENST00000591187 441 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 BNIP3P8-201ENST00000597863 560 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 SEPT7P9-203ENST00000604116 343 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.75□□□□□ -1.65
HPS3Q969F9 OR6R2P-201ENST00000609216 300 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 AC006329.2-201ENST00000611491 394 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 AL139089.1-201ENST00000620372 975 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 MIR6758-201ENST00000620653 63 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.75□□□□□ -1.65
HPS3Q969F9 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HPS3Q969F9 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
HPS3Q969F9 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
HPS3Q969F9 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HPS3Q969F9 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.75□□□□□ -1.65
HPS3Q969F9 TEX21P-201ENST00000447107 1476 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 AP002001.2-201ENST00000529025 1469 ntBASIC4.75□□□□□ -1.65
HPS3Q969F9 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HPS3Q969F9 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.74□□□□□ -1.65
HPS3Q969F9 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HPS3Q969F9 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
HPS3Q969F9 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HPS3Q969F9 U3.29-201ENST00000391296 212 ntBASIC4.74□□□□□ -1.65
HPS3Q969F9 SNORA11-201ENST00000408789 128 ntBASIC4.74□□□□□ -1.65
HPS3Q969F9 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.74□□□□□ -1.65
HPS3Q969F9 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.74□□□□□ -1.65
HPS3Q969F9 AL157831.1-201ENST00000426134 473 ntBASIC4.74□□□□□ -1.65
HPS3Q969F9 AL445669.1-201ENST00000426743 755 ntBASIC4.74□□□□□ -1.65
HPS3Q969F9 RPS29P17-201ENST00000430795 166 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms