Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 RNU2-21P-201ENST00000410368 188 ntBASIC2.7□□□□□ -1.98
LMX1AQ8TE12 RNA5SP21-201ENST00000410917 96 ntBASIC2.7□□□□□ -1.98
LMX1AQ8TE12 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.7□□□□□ -1.98
LMX1AQ8TE12 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.7□□□□□ -1.98
LMX1AQ8TE12 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.7□□□□□ -1.98
LMX1AQ8TE12 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.7□□□□□ -1.98
LMX1AQ8TE12 NEK4P1-201ENST00000433383 879 ntBASIC2.7□□□□□ -1.98
LMX1AQ8TE12 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.7□□□□□ -1.98
LMX1AQ8TE12 NECAP1P2-201ENST00000455668 727 ntBASIC2.7□□□□□ -1.98
LMX1AQ8TE12 RPL21P41-201ENST00000459863 264 ntBASIC2.7□□□□□ -1.98
LMX1AQ8TE12 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.7□□□□□ -1.98
LMX1AQ8TE12 AC117522.3-201ENST00000507974 584 ntBASIC2.7□□□□□ -1.98
LMX1AQ8TE12 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.7□□□□□ -1.98
LMX1AQ8TE12 AC108157.1-201ENST00000510511 539 ntBASIC2.7□□□□□ -1.98
LMX1AQ8TE12 AC017037.2-201ENST00000513850 890 ntBASIC2.7□□□□□ -1.98
LMX1AQ8TE12 RNU6-760P-201ENST00000516078 97 ntBASIC2.7□□□□□ -1.98
LMX1AQ8TE12 AC022784.5-201ENST00000522241 437 ntBASIC2.7□□□□□ -1.98
LMX1AQ8TE12 IGHV3-76-201ENST00000522465 295 ntBASIC2.7□□□□□ -1.98
LMX1AQ8TE12 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.7□□□□□ -1.98
LMX1AQ8TE12 AC010653.1-201ENST00000571108 881 ntBASIC2.7□□□□□ -1.98
LMX1AQ8TE12 MIR4435-1-201ENST00000582552 80 ntBASIC2.7□□□□□ -1.98
LMX1AQ8TE12 ZNF861P-201ENST00000588126 639 ntBASIC2.7□□□□□ -1.98
LMX1AQ8TE12 AC116312.1-201ENST00000606841 314 ntBASIC2.7□□□□□ -1.98
LMX1AQ8TE12 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.7□□□□□ -1.98
LMX1AQ8TE12 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
LMX1AQ8TE12 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
LMX1AQ8TE12 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.7□□□□□ -1.98
LMX1AQ8TE12 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LMX1AQ8TE12 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
LMX1AQ8TE12 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LMX1AQ8TE12 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 RNA5SP391-201ENST00000363456 119 ntBASIC2.69□□□□□ -1.98
LMX1AQ8TE12 AL445529.1-201ENST00000398713 389 ntBASIC2.69□□□□□ -1.98
LMX1AQ8TE12 EIF5P1-201ENST00000400019 1231 ntBASIC2.69□□□□□ -1.98
LMX1AQ8TE12 DNAJC19P6-201ENST00000401853 280 ntBASIC2.69□□□□□ -1.98
LMX1AQ8TE12 RNU2-6P-201ENST00000411404 190 ntBASIC2.69□□□□□ -1.98
LMX1AQ8TE12 XKRYP4-201ENST00000414395 483 ntBASIC2.69□□□□□ -1.98
LMX1AQ8TE12 HMGB3P23-201ENST00000414981 585 ntBASIC2.69□□□□□ -1.98
LMX1AQ8TE12 AC234782.4-201ENST00000417646 1048 ntBASIC2.69□□□□□ -1.98
LMX1AQ8TE12 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 Z93242.1-201ENST00000427102 353 ntBASIC2.69□□□□□ -1.98
LMX1AQ8TE12 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 MTCO1P43-201ENST00000431831 488 ntBASIC2.69□□□□□ -1.98
LMX1AQ8TE12 RPL21P112-201ENST00000434403 463 ntBASIC2.69□□□□□ -1.98
LMX1AQ8TE12 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 HMGB1P12-201ENST00000438594 598 ntBASIC2.69□□□□□ -1.98
LMX1AQ8TE12 RPL23AP33-201ENST00000442301 452 ntBASIC2.69□□□□□ -1.98
LMX1AQ8TE12 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 XKRYP5-201ENST00000449659 483 ntBASIC2.69□□□□□ -1.98
LMX1AQ8TE12 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 AC107398.1-201ENST00000486904 505 ntBASIC2.69□□□□□ -1.98
LMX1AQ8TE12 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 AC025459.1-201ENST00000504072 156 ntBASIC2.69□□□□□ -1.98
LMX1AQ8TE12 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 HMGB1P47-201ENST00000511281 589 ntBASIC2.69□□□□□ -1.98
LMX1AQ8TE12 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 AC093755.1-201ENST00000512950 1023 ntBASIC2.69□□□□□ -1.98
LMX1AQ8TE12 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 RNA5SP380-201ENST00000517190 98 ntBASIC2.69□□□□□ -1.98
LMX1AQ8TE12 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 AC092608.2-201ENST00000624427 218 ntBASIC2.69□□□□□ -1.98
LMX1AQ8TE12 MIR4496-201ENST00000635896 61 ntBASIC2.69□□□□□ -1.98
LMX1AQ8TE12 FAM157B-203ENST00000639350 358 ntBASIC2.69□□□□□ -1.98
LMX1AQ8TE12 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LMX1AQ8TE12 AC007256.1-201ENST00000392253 2765 ntBASIC2.69□□□□□ -1.98
LMX1AQ8TE12 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LMX1AQ8TE12 GTF2H2B-203ENST00000508065 1432 ntBASIC2.68□□□□□ -1.98
LMX1AQ8TE12 AL359693.1-201ENST00000614959 2407 ntBASIC2.68□□□□□ -1.98
LMX1AQ8TE12 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
LMX1AQ8TE12 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
LMX1AQ8TE12 AL672167.1-206ENST00000356293 943 ntBASIC2.68□□□□□ -1.98
LMX1AQ8TE12 MIR148B-201ENST00000362252 99 ntBASIC2.68□□□□□ -1.98
LMX1AQ8TE12 SNORA7.2-201ENST00000364446 145 ntBASIC2.68□□□□□ -1.98
LMX1AQ8TE12 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LMX1AQ8TE12 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
LMX1AQ8TE12 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LMX1AQ8TE12 RPL31P1-201ENST00000398116 372 ntBASIC2.68□□□□□ -1.98
LMX1AQ8TE12 AC010385.1-201ENST00000412374 256 ntBASIC2.68□□□□□ -1.98
LMX1AQ8TE12 AC241520.1-201ENST00000422654 1099 ntBASIC2.68□□□□□ -1.98
LMX1AQ8TE12 PTP4A1P3-201ENST00000433661 420 ntBASIC2.68□□□□□ -1.98
LMX1AQ8TE12 B3GNT2P1-201ENST00000434960 952 ntBASIC2.68□□□□□ -1.98
LMX1AQ8TE12 HMGB1P45-201ENST00000435986 653 ntBASIC2.68□□□□□ -1.98
LMX1AQ8TE12 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms