Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 AP001330.4-201ENST00000604350 154 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 AP000787.2-201ENST00000604432 568 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC2.18□□□□□ -2.06
NUP35Q8NFH5 MIR3670-4-201ENST00000612260 65 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 AL355493.4-201ENST00000618530 292 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 AC079228.1-201ENST00000624774 1049 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.18□□□□□ -2.06
NUP35Q8NFH5 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.18□□□□□ -2.06
NUP35Q8NFH5 AC026241.1-201ENST00000517873 2142 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 CUL1P1-201ENST00000509510 2425 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.17□□□□□ -2.06
NUP35Q8NFH5 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
NUP35Q8NFH5 RNA5SP258-201ENST00000362750 119 ntBASIC2.17□□□□□ -2.06
NUP35Q8NFH5 AL353692.2-201ENST00000407054 335 ntBASIC2.17□□□□□ -2.06
NUP35Q8NFH5 AC010385.1-201ENST00000412374 256 ntBASIC2.17□□□□□ -2.06
NUP35Q8NFH5 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.17□□□□□ -2.06
NUP35Q8NFH5 RPS7P15-201ENST00000415804 584 ntBASIC2.17□□□□□ -2.06
NUP35Q8NFH5 NIPA2P1-201ENST00000426223 976 ntBASIC2.17□□□□□ -2.06
NUP35Q8NFH5 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.17□□□□□ -2.06
NUP35Q8NFH5 LSM1P1-201ENST00000438629 273 ntBASIC2.17□□□□□ -2.06
NUP35Q8NFH5 MTCYBP34-201ENST00000439552 670 ntBASIC2.17□□□□□ -2.06
NUP35Q8NFH5 AC097499.1-201ENST00000444277 208 ntBASIC2.17□□□□□ -2.06
NUP35Q8NFH5 AL162389.1-201ENST00000449233 177 ntBASIC2.17□□□□□ -2.06
NUP35Q8NFH5 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC2.17□□□□□ -2.06
NUP35Q8NFH5 AC034236.1-201ENST00000469891 373 ntBASIC2.17□□□□□ -2.06
NUP35Q8NFH5 AP000852.1-201ENST00000472460 573 ntBASIC2.17□□□□□ -2.06
NUP35Q8NFH5 AC090525.1-201ENST00000479116 478 ntBASIC2.17□□□□□ -2.06
NUP35Q8NFH5 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.17□□□□□ -2.06
NUP35Q8NFH5 RNF138P1-201ENST00000502765 546 ntBASIC2.17□□□□□ -2.06
NUP35Q8NFH5 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.17□□□□□ -2.06
NUP35Q8NFH5 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.17□□□□□ -2.06
NUP35Q8NFH5 HMGB1P23-201ENST00000518743 568 ntBASIC2.17□□□□□ -2.06
NUP35Q8NFH5 AC026403.1-201ENST00000518938 295 ntBASIC2.17□□□□□ -2.06
NUP35Q8NFH5 OR5B10P-201ENST00000532869 642 ntBASIC2.17□□□□□ -2.06
NUP35Q8NFH5 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.17□□□□□ -2.06
NUP35Q8NFH5 AL442163.2-201ENST00000553912 710 ntBASIC2.17□□□□□ -2.06
NUP35Q8NFH5 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.17□□□□□ -2.06
NUP35Q8NFH5 MIR5186-201ENST00000577504 120 ntBASIC2.17□□□□□ -2.06
NUP35Q8NFH5 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
NUP35Q8NFH5 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.17□□□□□ -2.06
NUP35Q8NFH5 AC005229.3-201ENST00000603438 323 ntBASIC2.17□□□□□ -2.06
NUP35Q8NFH5 AC128687.1-201ENST00000605304 619 ntBASIC2.17□□□□□ -2.06
NUP35Q8NFH5 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.17□□□□□ -2.06
NUP35Q8NFH5 AL360181.4-201ENST00000621752 134 ntBASIC2.17□□□□□ -2.06
NUP35Q8NFH5 AL356863.1-201ENST00000623378 1080 ntBASIC2.17□□□□□ -2.06
NUP35Q8NFH5 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.17□□□□□ -2.06
NUP35Q8NFH5 MTND4P8-201ENST00000514997 1362 ntBASIC2.17□□□□□ -2.06
NUP35Q8NFH5 SGO1P2-201ENST00000429458 1589 ntBASIC2.17□□□□□ -2.06
NUP35Q8NFH5 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
NUP35Q8NFH5 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NUP35Q8NFH5 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
NUP35Q8NFH5 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NUP35Q8NFH5 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
NUP35Q8NFH5 SAGE4P-201ENST00000442271 3381 ntBASIC2.16□□□□□ -2.06
NUP35Q8NFH5 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
NUP35Q8NFH5 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
NUP35Q8NFH5 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.16□□□□□ -2.06
NUP35Q8NFH5 RNU6-670P-201ENST00000364312 104 ntBASIC2.16□□□□□ -2.06
NUP35Q8NFH5 AC234772.1-201ENST00000377927 937 ntBASIC2.16□□□□□ -2.06
NUP35Q8NFH5 HMGN2P35-201ENST00000412164 270 ntBASIC2.16□□□□□ -2.06
NUP35Q8NFH5 RPS29P4-201ENST00000414733 161 ntBASIC2.16□□□□□ -2.06
NUP35Q8NFH5 RPL36AP36-201ENST00000418616 301 ntBASIC2.16□□□□□ -2.06
NUP35Q8NFH5 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.16□□□□□ -2.06
NUP35Q8NFH5 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
NUP35Q8NFH5 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.16□□□□□ -2.06
NUP35Q8NFH5 MRPL50P4-201ENST00000446432 475 ntBASIC2.16□□□□□ -2.06
NUP35Q8NFH5 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.16□□□□□ -2.06
NUP35Q8NFH5 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.16□□□□□ -2.06
NUP35Q8NFH5 AC025459.1-201ENST00000504072 156 ntBASIC2.16□□□□□ -2.06
NUP35Q8NFH5 TBCAP3-201ENST00000512475 312 ntBASIC2.16□□□□□ -2.06
NUP35Q8NFH5 SCARNA13-201ENST00000516672 275 ntBASIC2.16□□□□□ -2.06
NUP35Q8NFH5 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC2.16□□□□□ -2.06
NUP35Q8NFH5 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
NUP35Q8NFH5 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.16□□□□□ -2.06
NUP35Q8NFH5 OR8I1P-201ENST00000529291 931 ntBASIC2.16□□□□□ -2.06
NUP35Q8NFH5 AC093014.1-201ENST00000548926 724 ntBASIC2.16□□□□□ -2.06
NUP35Q8NFH5 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.16□□□□□ -2.06
NUP35Q8NFH5 AL355836.1-201ENST00000555951 870 ntBASIC2.16□□□□□ -2.06
NUP35Q8NFH5 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.16□□□□□ -2.06
NUP35Q8NFH5 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.16□□□□□ -2.06
NUP35Q8NFH5 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.16□□□□□ -2.06
NUP35Q8NFH5 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.16□□□□□ -2.06
NUP35Q8NFH5 AC010620.2-201ENST00000600135 313 ntBASIC2.16□□□□□ -2.06
NUP35Q8NFH5 AL356575.1-201ENST00000603008 283 ntBASIC2.16□□□□□ -2.06
NUP35Q8NFH5 U73023.1-201ENST00000603134 700 ntBASIC2.16□□□□□ -2.06
NUP35Q8NFH5 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
NUP35Q8NFH5 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.16□□□□□ -2.06
NUP35Q8NFH5 AC138932.5-201ENST00000617759 563 ntBASIC2.16□□□□□ -2.06
NUP35Q8NFH5 AC039056.2-201ENST00000622261 511 ntBASIC2.16□□□□□ -2.06
NUP35Q8NFH5 AC091953.5-201ENST00000622919 233 ntBASIC2.16□□□□□ -2.06
NUP35Q8NFH5 AC097372.4-201ENST00000625025 466 ntBASIC2.16□□□□□ -2.06
NUP35Q8NFH5 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.16□□□□□ -2.06
NUP35Q8NFH5 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.16□□□□□ -2.06
NUP35Q8NFH5 AC099654.7-201ENST00000635788 2127 ntBASIC2.16□□□□□ -2.06
NUP35Q8NFH5 MIR622-201ENST00000638396 96 ntBASIC2.16□□□□□ -2.06
NUP35Q8NFH5 AC139713.2-210ENST00000641741 992 ntBASIC2.16□□□□□ -2.06
NUP35Q8NFH5 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.16□□□□□ -2.06
NUP35Q8NFH5 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
NUP35Q8NFH5 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
NUP35Q8NFH5 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.15□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms