Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
USP38Q8NB14 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.44□□□□□ -1.7
USP38Q8NB14 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
USP38Q8NB14 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
USP38Q8NB14 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
USP38Q8NB14 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.44□□□□□ -1.7
USP38Q8NB14 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
USP38Q8NB14 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
USP38Q8NB14 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
USP38Q8NB14 AP000526.1-201ENST00000603308 1388 ntBASIC4.43□□□□□ -1.7
USP38Q8NB14 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
USP38Q8NB14 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
USP38Q8NB14 SNORD82-201ENST00000365530 70 ntBASIC4.43□□□□□ -1.7
USP38Q8NB14 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
USP38Q8NB14 RNU6-1200P-201ENST00000384162 107 ntBASIC4.43□□□□□ -1.7
USP38Q8NB14 MIR128-1-201ENST00000384921 82 ntBASIC4.43□□□□□ -1.7
USP38Q8NB14 MT-TC-201ENST00000387405 66 ntBASIC4.43□□□□□ -1.7
USP38Q8NB14 AL590084.2-201ENST00000401481 382 ntBASIC4.43□□□□□ -1.7
USP38Q8NB14 AL024474.1-201ENST00000404655 591 ntBASIC4.43□□□□□ -1.7
USP38Q8NB14 AL356131.1-201ENST00000405826 414 ntBASIC4.43□□□□□ -1.7
USP38Q8NB14 AL358472.1-201ENST00000431295 329 ntBASIC4.43□□□□□ -1.7
USP38Q8NB14 YWHAZP7-201ENST00000436906 631 ntBASIC4.43□□□□□ -1.7
USP38Q8NB14 MTND5P2-201ENST00000442927 1142 ntBASIC4.43□□□□□ -1.7
USP38Q8NB14 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.43□□□□□ -1.7
USP38Q8NB14 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC4.43□□□□□ -1.7
USP38Q8NB14 RSL24D1P3-201ENST00000449255 495 ntBASIC4.43□□□□□ -1.7
USP38Q8NB14 ART2BP-201ENST00000453501 499 ntBASIC4.43□□□□□ -1.7
USP38Q8NB14 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.43□□□□□ -1.7
USP38Q8NB14 RN7SL271P-201ENST00000487601 295 ntBASIC4.43□□□□□ -1.7
USP38Q8NB14 AC104685.1-201ENST00000502445 371 ntBASIC4.43□□□□□ -1.7
USP38Q8NB14 AC108941.1-201ENST00000502853 530 ntBASIC4.43□□□□□ -1.7
USP38Q8NB14 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.43□□□□□ -1.7
USP38Q8NB14 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.43□□□□□ -1.7
USP38Q8NB14 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
USP38Q8NB14 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.43□□□□□ -1.7
USP38Q8NB14 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.43□□□□□ -1.7
USP38Q8NB14 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
USP38Q8NB14 OR8L1P-201ENST00000534005 955 ntBASIC4.43□□□□□ -1.7
USP38Q8NB14 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.43□□□□□ -1.7
USP38Q8NB14 CBX3P5-201ENST00000552017 521 ntBASIC4.43□□□□□ -1.7
USP38Q8NB14 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.43□□□□□ -1.7
USP38Q8NB14 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.43□□□□□ -1.7
USP38Q8NB14 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.43□□□□□ -1.7
USP38Q8NB14 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.43□□□□□ -1.7
USP38Q8NB14 AC068790.5-201ENST00000602741 355 ntBASIC4.43□□□□□ -1.7
USP38Q8NB14 AC090116.1-201ENST00000615679 446 ntBASIC4.43□□□□□ -1.7
USP38Q8NB14 AC009318.4-201ENST00000620496 486 ntBASIC4.43□□□□□ -1.7
USP38Q8NB14 AC103858.2-201ENST00000621471 543 ntBASIC4.43□□□□□ -1.7
USP38Q8NB14 AC078883.4-201ENST00000623218 367 ntBASIC4.43□□□□□ -1.7
USP38Q8NB14 AP000676.3-201ENST00000623299 569 ntBASIC4.43□□□□□ -1.7
USP38Q8NB14 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.43□□□□□ -1.7
USP38Q8NB14 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.43□□□□□ -1.7
USP38Q8NB14 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
USP38Q8NB14 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
USP38Q8NB14 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
USP38Q8NB14 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.43□□□□□ -1.7
USP38Q8NB14 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
USP38Q8NB14 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.42□□□□□ -1.7
USP38Q8NB14 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
USP38Q8NB14 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
USP38Q8NB14 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.42□□□□□ -1.7
USP38Q8NB14 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.42□□□□□ -1.7
USP38Q8NB14 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
USP38Q8NB14 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.42□□□□□ -1.7
USP38Q8NB14 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
USP38Q8NB14 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.42□□□□□ -1.7
USP38Q8NB14 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
USP38Q8NB14 MIR124-3-201ENST00000384866 87 ntBASIC4.42□□□□□ -1.7
USP38Q8NB14 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
USP38Q8NB14 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.42□□□□□ -1.7
USP38Q8NB14 AC107081.1-201ENST00000414975 361 ntBASIC4.42□□□□□ -1.7
USP38Q8NB14 RAC1P3-201ENST00000416129 580 ntBASIC4.42□□□□□ -1.7
USP38Q8NB14 AC098592.1-201ENST00000419352 333 ntBASIC4.42□□□□□ -1.7
USP38Q8NB14 AL391219.1-201ENST00000422570 483 ntBASIC4.42□□□□□ -1.7
USP38Q8NB14 AL022400.1-201ENST00000423946 935 ntBASIC4.42□□□□□ -1.7
USP38Q8NB14 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.42□□□□□ -1.7
USP38Q8NB14 AL593851.1-201ENST00000426171 157 ntBASIC4.42□□□□□ -1.7
USP38Q8NB14 AL159987.2-201ENST00000432754 307 ntBASIC4.42□□□□□ -1.7
USP38Q8NB14 TBCAP1-201ENST00000436520 327 ntBASIC4.42□□□□□ -1.7
USP38Q8NB14 OR6K5P-201ENST00000447050 945 ntBASIC4.42□□□□□ -1.7
USP38Q8NB14 AL133217.1-201ENST00000450980 425 ntBASIC4.42□□□□□ -1.7
USP38Q8NB14 RPL26P28-201ENST00000451325 435 ntBASIC4.42□□□□□ -1.7
USP38Q8NB14 RPS15AP17-201ENST00000470598 390 ntBASIC4.42□□□□□ -1.7
USP38Q8NB14 AP000563.1-201ENST00000490865 758 ntBASIC4.42□□□□□ -1.7
USP38Q8NB14 AC147055.4-201ENST00000504399 745 ntBASIC4.42□□□□□ -1.7
USP38Q8NB14 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.42□□□□□ -1.7
USP38Q8NB14 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.42□□□□□ -1.7
USP38Q8NB14 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.42□□□□□ -1.7
USP38Q8NB14 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.42□□□□□ -1.7
USP38Q8NB14 RNU7-143P-201ENST00000516781 65 ntBASIC4.42□□□□□ -1.7
USP38Q8NB14 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.42□□□□□ -1.7
USP38Q8NB14 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.42□□□□□ -1.7
USP38Q8NB14 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.42□□□□□ -1.7
USP38Q8NB14 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.42□□□□□ -1.7
USP38Q8NB14 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.42□□□□□ -1.7
USP38Q8NB14 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.42□□□□□ -1.7
USP38Q8NB14 AC008015.1-201ENST00000555505 465 ntBASIC4.42□□□□□ -1.7
USP38Q8NB14 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.42□□□□□ -1.7
USP38Q8NB14 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.42□□□□□ -1.7
USP38Q8NB14 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms