Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC89Q8N998 AC024082.2-201ENST00000434771 238 ntBASIC4.01□□□□□ -1.77
CCDC89Q8N998 MTCYBP45-201ENST00000435243 565 ntBASIC4.01□□□□□ -1.77
CCDC89Q8N998 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC89Q8N998 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC89Q8N998 NUTF2P3-201ENST00000448540 384 ntBASIC4.01□□□□□ -1.77
CCDC89Q8N998 ZNF886P-201ENST00000450781 723 ntBASIC4.01□□□□□ -1.77
CCDC89Q8N998 NANOGP10-201ENST00000453325 895 ntBASIC4.01□□□□□ -1.77
CCDC89Q8N998 AC005410.1-202ENST00000460347 485 ntBASIC4.01□□□□□ -1.77
CCDC89Q8N998 MTND1P16-201ENST00000465177 898 ntBASIC4.01□□□□□ -1.77
CCDC89Q8N998 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC89Q8N998 RPL7P23-201ENST00000493874 747 ntBASIC4.01□□□□□ -1.77
CCDC89Q8N998 AC109445.1-201ENST00000512356 383 ntBASIC4.01□□□□□ -1.77
CCDC89Q8N998 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC89Q8N998 RNY4P37-201ENST00000516225 96 ntBASIC4.01□□□□□ -1.77
CCDC89Q8N998 SNORA70.16-201ENST00000516390 95 ntBASIC4.01□□□□□ -1.77
CCDC89Q8N998 RNU6-711P-201ENST00000517255 106 ntBASIC4.01□□□□□ -1.77
CCDC89Q8N998 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC89Q8N998 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC89Q8N998 AC087369.1-201ENST00000520775 996 ntBASIC4.01□□□□□ -1.77
CCDC89Q8N998 DEFB108D-201ENST00000527787 222 ntBASIC4.01□□□□□ -1.77
CCDC89Q8N998 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC89Q8N998 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CCDC89Q8N998 AC091057.3-201ENST00000602684 733 ntBASIC4.01□□□□□ -1.77
CCDC89Q8N998 DUXAP3-201ENST00000603616 594 ntBASIC4.01□□□□□ -1.77
CCDC89Q8N998 AL160237.3-201ENST00000604114 1013 ntBASIC4.01□□□□□ -1.77
CCDC89Q8N998 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC89Q8N998 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC89Q8N998 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC89Q8N998 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC89Q8N998 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.01□□□□□ -1.77
CCDC89Q8N998 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC89Q8N998 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
CCDC89Q8N998 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
CCDC89Q8N998 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC89Q8N998 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC89Q8N998 RNU4-68P-201ENST00000364314 141 ntBASIC4□□□□□ -1.77
CCDC89Q8N998 Y_RNA.311-201ENST00000365068 96 ntBASIC4□□□□□ -1.77
CCDC89Q8N998 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4□□□□□ -1.77
CCDC89Q8N998 RNU4-22P-201ENST00000411058 166 ntBASIC4□□□□□ -1.77
CCDC89Q8N998 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4□□□□□ -1.77
CCDC89Q8N998 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4□□□□□ -1.77
CCDC89Q8N998 RPL18P10-201ENST00000425606 538 ntBASIC4□□□□□ -1.77
CCDC89Q8N998 MTATP6P4-201ENST00000427725 675 ntBASIC4□□□□□ -1.77
CCDC89Q8N998 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4□□□□□ -1.77
CCDC89Q8N998 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4□□□□□ -1.77
CCDC89Q8N998 RPL36AP33-201ENST00000450395 310 ntBASIC4□□□□□ -1.77
CCDC89Q8N998 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4□□□□□ -1.77
CCDC89Q8N998 PTGES3P5-201ENST00000455109 434 ntBASIC4□□□□□ -1.77
CCDC89Q8N998 RNU7-136P-201ENST00000458819 69 ntBASIC4□□□□□ -1.77
CCDC89Q8N998 AC079395.1-201ENST00000510981 262 ntBASIC4□□□□□ -1.77
CCDC89Q8N998 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4□□□□□ -1.77
CCDC89Q8N998 AC022483.1-201ENST00000514020 567 ntBASIC4□□□□□ -1.77
CCDC89Q8N998 SNORD59.2-201ENST00000516873 68 ntBASIC4□□□□□ -1.77
CCDC89Q8N998 RN7SKP209-201ENST00000516888 304 ntBASIC4□□□□□ -1.77
CCDC89Q8N998 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4□□□□□ -1.77
CCDC89Q8N998 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4□□□□□ -1.77
CCDC89Q8N998 AC138701.1-201ENST00000524329 714 ntBASIC4□□□□□ -1.77
CCDC89Q8N998 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4□□□□□ -1.77
CCDC89Q8N998 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4□□□□□ -1.77
CCDC89Q8N998 MIR4284-201ENST00000578924 81 ntBASIC4□□□□□ -1.77
CCDC89Q8N998 AC023575.1-201ENST00000580510 358 ntBASIC4□□□□□ -1.77
CCDC89Q8N998 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4□□□□□ -1.77
CCDC89Q8N998 AP001269.3-201ENST00000588718 329 ntBASIC4□□□□□ -1.77
CCDC89Q8N998 MIR6820-201ENST00000611508 62 ntBASIC4□□□□□ -1.77
CCDC89Q8N998 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4□□□□□ -1.77
CCDC89Q8N998 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC89Q8N998 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4□□□□□ -1.77
CCDC89Q8N998 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC89Q8N998 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
CCDC89Q8N998 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC89Q8N998 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC89Q8N998 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC89Q8N998 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.99□□□□□ -1.77
CCDC89Q8N998 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
CCDC89Q8N998 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
CCDC89Q8N998 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC89Q8N998 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC89Q8N998 AC099786.3-201ENST00000565735 1410 ntBASIC3.99□□□□□ -1.77
CCDC89Q8N998 AC073429.2-201ENST00000569694 1444 ntBASIC3.99□□□□□ -1.77
CCDC89Q8N998 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC89Q8N998 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.99□□□□□ -1.77
CCDC89Q8N998 Y_RNA.465-201ENST00000384293 102 ntBASIC3.99□□□□□ -1.77
CCDC89Q8N998 MIR199A2-201ENST00000385289 110 ntBASIC3.99□□□□□ -1.77
CCDC89Q8N998 RSL24D1P1-201ENST00000404972 493 ntBASIC3.99□□□□□ -1.77
CCDC89Q8N998 PPIAP31-201ENST00000405422 495 ntBASIC3.99□□□□□ -1.77
CCDC89Q8N998 RNU4-6P-201ENST00000410804 122 ntBASIC3.99□□□□□ -1.77
CCDC89Q8N998 AL513175.2-201ENST00000422071 443 ntBASIC3.99□□□□□ -1.77
CCDC89Q8N998 AL139421.1-201ENST00000423010 169 ntBASIC3.99□□□□□ -1.77
CCDC89Q8N998 TMEM167AP1-201ENST00000423409 219 ntBASIC3.99□□□□□ -1.77
CCDC89Q8N998 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC89Q8N998 ATP5F1P1-201ENST00000433775 569 ntBASIC3.99□□□□□ -1.77
CCDC89Q8N998 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC89Q8N998 AL592447.1-201ENST00000447592 540 ntBASIC3.99□□□□□ -1.77
CCDC89Q8N998 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC89Q8N998 AC234775.1-201ENST00000454247 670 ntBASIC3.99□□□□□ -1.77
CCDC89Q8N998 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC89Q8N998 TRBV12-2-201ENST00000489763 344 ntBASIC3.99□□□□□ -1.77
CCDC89Q8N998 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC89Q8N998 WBP1LP4-201ENST00000505043 344 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms