Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 AC099522.1-202ENST00000514718 367 ntBASIC3.79□□□□□ -1.8
LSMEM1Q8N8F7 SNORA70.16-201ENST00000516390 95 ntBASIC3.79□□□□□ -1.8
LSMEM1Q8N8F7 RNU6-714P-201ENST00000516963 103 ntBASIC3.79□□□□□ -1.8
LSMEM1Q8N8F7 AC239860.2-201ENST00000525886 270 ntBASIC3.79□□□□□ -1.8
LSMEM1Q8N8F7 AC006518.1-201ENST00000541449 943 ntBASIC3.79□□□□□ -1.8
LSMEM1Q8N8F7 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.79□□□□□ -1.8
LSMEM1Q8N8F7 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.79□□□□□ -1.8
LSMEM1Q8N8F7 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.79□□□□□ -1.8
LSMEM1Q8N8F7 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LSMEM1Q8N8F7 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.79□□□□□ -1.8
LSMEM1Q8N8F7 AC007349.4-201ENST00000608114 532 ntBASIC3.79□□□□□ -1.8
LSMEM1Q8N8F7 AC008121.2-201ENST00000614647 523 ntBASIC3.79□□□□□ -1.8
LSMEM1Q8N8F7 AP002782.1-201ENST00000623107 614 ntBASIC3.79□□□□□ -1.8
LSMEM1Q8N8F7 AP001002.2-201ENST00000625137 386 ntBASIC3.79□□□□□ -1.8
LSMEM1Q8N8F7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.79□□□□□ -1.8
LSMEM1Q8N8F7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LSMEM1Q8N8F7 AC008568.2-201ENST00000623862 2313 ntBASIC3.79□□□□□ -1.8
LSMEM1Q8N8F7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
LSMEM1Q8N8F7 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LSMEM1Q8N8F7 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
LSMEM1Q8N8F7 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
LSMEM1Q8N8F7 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
LSMEM1Q8N8F7 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LSMEM1Q8N8F7 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LSMEM1Q8N8F7 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LSMEM1Q8N8F7 AC021755.1-201ENST00000559747 1447 ntBASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 AC011477.1-204ENST00000623416 1325 ntBASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 RNA5SP509-201ENST00000364577 119 ntBASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 RPS4XP3-201ENST00000398541 413 ntBASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 RNU6-1077P-201ENST00000410506 102 ntBASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 RPL30P2-201ENST00000414021 291 ntBASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 AC006960.1-201ENST00000419980 153 ntBASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 RPL17P36-201ENST00000420302 549 ntBASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 BTF3P10-201ENST00000433415 495 ntBASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 RPS29P33-201ENST00000456717 146 ntBASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 USP9YP25-201ENST00000457708 443 ntBASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 AC011276.1-201ENST00000469688 323 ntBASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 RPL30P14-201ENST00000482744 348 ntBASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 RN7SL271P-201ENST00000487601 295 ntBASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 RNU6-711P-201ENST00000517255 106 ntBASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 IGKV2-38-201ENST00000517443 247 ntBASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 PSMB7P1-201ENST00000556349 514 ntBASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 AP001429.1-201ENST00000602568 530 ntBASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 AC104662.1-201ENST00000604448 511 ntBASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 AC090246.1-201ENST00000616499 426 ntBASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 AC079228.1-201ENST00000624774 1049 ntBASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 AL159972.1-201ENST00000625150 448 ntBASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LSMEM1Q8N8F7 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
LSMEM1Q8N8F7 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
LSMEM1Q8N8F7 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
LSMEM1Q8N8F7 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.77□□□□□ -1.81
LSMEM1Q8N8F7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
LSMEM1Q8N8F7 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
LSMEM1Q8N8F7 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.77□□□□□ -1.81
LSMEM1Q8N8F7 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LSMEM1Q8N8F7 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
LSMEM1Q8N8F7 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
LSMEM1Q8N8F7 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LSMEM1Q8N8F7 RNU6-1242P-201ENST00000391052 103 ntBASIC3.77□□□□□ -1.81
LSMEM1Q8N8F7 SKINT1L-201ENST00000401057 817 ntBASIC3.77□□□□□ -1.81
LSMEM1Q8N8F7 AL356421.1-201ENST00000403255 413 ntBASIC3.77□□□□□ -1.81
LSMEM1Q8N8F7 RPS3AP24-201ENST00000407896 734 ntBASIC3.77□□□□□ -1.81
LSMEM1Q8N8F7 U3.42-201ENST00000408746 214 ntBASIC3.77□□□□□ -1.81
LSMEM1Q8N8F7 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.77□□□□□ -1.81
LSMEM1Q8N8F7 PGBD4P8-201ENST00000412993 562 ntBASIC3.77□□□□□ -1.81
LSMEM1Q8N8F7 AL356867.1-201ENST00000429623 299 ntBASIC3.77□□□□□ -1.81
LSMEM1Q8N8F7 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.77□□□□□ -1.81
LSMEM1Q8N8F7 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.77□□□□□ -1.81
LSMEM1Q8N8F7 ARPC3P2-201ENST00000457786 533 ntBASIC3.77□□□□□ -1.81
LSMEM1Q8N8F7 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms